RNA–Protein interactions for RNA: ENST00000520143.1

IGHV3-57-201, Transcript of immunoglobulin heavy variable 3-57 (pseudogene), humanhuman

BASIC

Gene IGHV3-57, Length 280 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-57-201ENST00000520143 AEBP2Q6ZN18 517 aaPredicted RBP17.82■□□□□ 0.44
IGHV3-57-201ENST00000520143 CHIC1Q5VXU3 224 aa17.19■□□□□ 0.34
IGHV3-57-201ENST00000520143 SENP3Q9H4L4 574 aaPredicted RBP15.18■□□□□ 0.02
IGHV3-57-201ENST00000520143 PHF23Q9BUL5 403 aaPredicted RBP15.1■□□□□ 0.01
IGHV3-57-201ENST00000520143 NISCHQ9Y2I1 1504 aa14.85□□□□□ -0.03
IGHV3-57-201ENST00000520143 FOXD1Q16676 465 aa14.1□□□□□ -0.15
IGHV3-57-201ENST00000520143 PLPPR3Q6T4P5 718 aa13.88□□□□□ -0.19
IGHV3-57-201ENST00000520143 PPP6R1Q9UPN7 881 aa13.4□□□□□ -0.26
IGHV3-57-201ENST00000520143 ADRA2BP18089 450 aa13.38□□□□□ -0.27
IGHV3-57-201ENST00000520143 PIAS4Q8N2W9 510 aaPredicted RBP13.26□□□□□ -0.29
IGHV3-57-201ENST00000520143 MSH5O43196 834 aa13.11□□□□□ -0.31
IGHV3-57-201ENST00000520143 CCDC180Q9P1Z9 1646 aa12.97□□□□□ -0.33
IGHV3-57-201ENST00000520143 ZCCHC6Q5VYS8 1495 aaKnown RBP12.49□□□□□ -0.41
IGHV3-57-201ENST00000520143 DCAF1Q9Y4B6 1507 aa12.32□□□□□ -0.44
IGHV3-57-201ENST00000520143 POTEDQ86YR6 584 aa12.32□□□□□ -0.44
IGHV3-57-201ENST00000520143 SCAF1Q9H7N4 1312 aaKnown RBP12.26□□□□□ -0.45
IGHV3-57-201ENST00000520143 MAPK8IP2Q13387 824 aaPredicted RBP12.21□□□□□ -0.45
IGHV3-57-201ENST00000520143 PPP4R3CPQ6ZMV5 832 aa12.2□□□□□ -0.46
IGHV3-57-201ENST00000520143 MYO15BQ96JP2 1530 aa12.15□□□□□ -0.46
IGHV3-57-201ENST00000520143 DCAF8L2P0C7V8 631 aa12.13□□□□□ -0.47
IGHV3-57-201ENST00000520143 SHROOM4Q9ULL8 1493 aa12.08□□□□□ -0.48
IGHV3-57-201ENST00000520143 DMRT2Q9Y5R5 561 aa12.07□□□□□ -0.48
IGHV3-57-201ENST00000520143 ABCC9O60706 1549 aa12.06□□□□□ -0.48
IGHV3-57-201ENST00000520143 NACADO15069 1562 aa12.02□□□□□ -0.49
IGHV3-57-201ENST00000520143 CNKSR2Q8WXI2 1034 aa11.9□□□□□ -0.5
IGHV3-57-201ENST00000520143 RB1CC1Q8TDY2 1594 aa11.88□□□□□ -0.51
IGHV3-57-201ENST00000520143 SCRIBQ14160 1630 aa11.85□□□□□ -0.51
IGHV3-57-201ENST00000520143 NCBP3Q53F19 620 aaKnown RBP11.83□□□□□ -0.52
IGHV3-57-201ENST00000520143 HOXD11P31277 338 aaPredicted RBP11.72□□□□□ -0.53
IGHV3-57-201ENST00000520143 RNF216Q9NWF9 866 aaPredicted RBP11.72□□□□□ -0.53
IGHV3-57-201ENST00000520143 SUPT5HO00267 1087 aaKnown RBP11.69□□□□□ -0.54
IGHV3-57-201ENST00000520143 UNC13AQ9UPW8 1703 aa11.69□□□□□ -0.54
IGHV3-57-201ENST00000520143 KCNA4P22459 653 aa11.66□□□□□ -0.54
IGHV3-57-201ENST00000520143 NPM3O75607 178 aaKnown RBP11.64□□□□□ -0.55
IGHV3-57-201ENST00000520143 DCAF8L1A6NGE4 600 aa11.6□□□□□ -0.55
IGHV3-57-201ENST00000520143 RSF1Q96T23 1441 aaPredicted RBP11.53□□□□□ -0.56
IGHV3-57-201ENST00000520143 BICRAQ9NZM4 1560 aa11.51□□□□□ -0.57
IGHV3-57-201ENST00000520143 CECR2Q9BXF3 1484 aa11.49□□□□□ -0.57
IGHV3-57-201ENST00000520143 BAZ1AQ9NRL2 1556 aaPredicted RBP11.47□□□□□ -0.57
IGHV3-57-201ENST00000520143 MROH2BQ7Z745 1585 aa11.45□□□□□ -0.58
IGHV3-57-201ENST00000520143 SMARCA4P51532 1647 aa11.4□□□□□ -0.58
IGHV3-57-201ENST00000520143 WIZO95785 1651 aa11.38□□□□□ -0.59
IGHV3-57-201ENST00000520143 PABPN1Q86U42 306 aaKnown RBP eCLIP11.36□□□□□ -0.59
IGHV3-57-201ENST00000520143 DNAJC5BQ9UF47 199 aa11.3□□□□□ -0.6
IGHV3-57-201ENST00000520143 PEG3Q9GZU2 1588 aa11.28□□□□□ -0.6
IGHV3-57-201ENST00000520143 TOP2AP11388 1531 aaKnown RBP11.28□□□□□ -0.6
IGHV3-57-201ENST00000520143 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.21□□□□□ -0.61
IGHV3-57-201ENST00000520143 RNF39Q9H2S5 420 aa11.2□□□□□ -0.62
IGHV3-57-201ENST00000520143 SMARCA2P51531 1590 aa11.2□□□□□ -0.62
IGHV3-57-201ENST00000520143 ATAD2BQ9ULI0 1458 aa11.17□□□□□ -0.62
IGHV3-57-201ENST00000520143 EIF4G1Q04637 1599 aaKnown RBP11.15□□□□□ -0.62
IGHV3-57-201ENST00000520143 CCDC88BA6NC98 1476 aa11.14□□□□□ -0.63
IGHV3-57-201ENST00000520143 BAZ1BQ9UIG0 1483 aaKnown RBP11.11□□□□□ -0.63
IGHV3-57-201ENST00000520143 CACNB1Q02641 598 aaPredicted RBP11.1□□□□□ -0.63
IGHV3-57-201ENST00000520143 HMGXB3Q12766 1538 aa11.09□□□□□ -0.63
IGHV3-57-201ENST00000520143 NCAPD3P42695 1498 aa11.07□□□□□ -0.64
IGHV3-57-201ENST00000520143 SLC4A1APQ9BWU0 796 aaKnown RBP11.07□□□□□ -0.64
IGHV3-57-201ENST00000520143 C1QBPQ07021 282 aaKnown RBP11.06□□□□□ -0.64
IGHV3-57-201ENST00000520143 SLC4A2P04920 1241 aa11.03□□□□□ -0.64
IGHV3-57-201ENST00000520143 TRIM41Q8WV44 630 aa11.03□□□□□ -0.64
IGHV3-57-201ENST00000520143 U3KPZ7 1027 aaPredicted RBP10.98□□□□□ -0.65
IGHV3-57-201ENST00000520143 CC2D2AQ9P2K1 1620 aa10.95□□□□□ -0.66
IGHV3-57-201ENST00000520143 ABCC8Q09428 1581 aa10.92□□□□□ -0.66
IGHV3-57-201ENST00000520143 PRDM2Q13029 1718 aa10.89□□□□□ -0.67
IGHV3-57-201ENST00000520143 WRNQ14191 1432 aaPredicted RBP eCLIP10.86□□□□□ -0.67
IGHV3-57-201ENST00000520143 CFTRP13569 1480 aa10.84□□□□□ -0.67
IGHV3-57-201ENST00000520143 LOC105371045A0A1W2PR82 267 aa10.82□□□□□ -0.68
IGHV3-57-201ENST00000520143 SYNJ1O43426 1573 aa10.82□□□□□ -0.68
IGHV3-57-201ENST00000520143 FOXD4L1Q9NU39 408 aa10.8□□□□□ -0.68
IGHV3-57-201ENST00000520143 EEA1Q15075 1411 aa10.8□□□□□ -0.68
IGHV3-57-201ENST00000520143 BIVM-ERCC5R4GMW8 1640 aa10.8□□□□□ -0.68
IGHV3-57-201ENST00000520143 TOP2BQ02880 1626 aa10.79□□□□□ -0.68
IGHV3-57-201ENST00000520143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.78□□□□□ -0.68
IGHV3-57-201ENST00000520143 HNRNPUL2Q1KMD3 747 aaKnown RBP10.78□□□□□ -0.68
IGHV3-57-201ENST00000520143 CADPSQ9ULU8 1353 aa10.77□□□□□ -0.68
IGHV3-57-201ENST00000520143 FAM9AQ8IZU1 332 aaPredicted RBP10.77□□□□□ -0.69
IGHV3-57-201ENST00000520143 MYCNP04198 464 aaPredicted RBP10.76□□□□□ -0.69
IGHV3-57-201ENST00000520143 SPINK5Q9NQ38 1064 aaPredicted RBP10.75□□□□□ -0.69
IGHV3-57-201ENST00000520143 CAPN15O75808 1086 aa10.74□□□□□ -0.69
IGHV3-57-201ENST00000520143 APLP2Q06481 763 aa10.73□□□□□ -0.69
IGHV3-57-201ENST00000520143 SAMD1Q6SPF0 538 aaPredicted RBP10.73□□□□□ -0.69
IGHV3-57-201ENST00000520143 SOGA1O94964 1423 aa10.73□□□□□ -0.69
IGHV3-57-201ENST00000520143 ZBTB22O15209 634 aa10.71□□□□□ -0.69
IGHV3-57-201ENST00000520143 CUX1P39880 1505 aa10.71□□□□□ -0.69
IGHV3-57-201ENST00000520143 LAMC3Q9Y6N6 1575 aa10.7□□□□□ -0.7
IGHV3-57-201ENST00000520143 CSRNP3Q8WYN3 585 aa10.69□□□□□ -0.7
IGHV3-57-201ENST00000520143 RUSC2Q8N2Y8 1516 aa10.68□□□□□ -0.7
IGHV3-57-201ENST00000520143 KIF21BO75037 1637 aa10.66□□□□□ -0.7
IGHV3-57-201ENST00000520143 FANCD2Q9BXW9 1451 aa10.65□□□□□ -0.7
IGHV3-57-201ENST00000520143 GOLGA3Q08378 1498 aa10.63□□□□□ -0.71
IGHV3-57-201ENST00000520143 TRHP20396 242 aaPredicted RBP10.63□□□□□ -0.71
IGHV3-57-201ENST00000520143 CEP164Q9UPV0 1460 aa10.62□□□□□ -0.71
IGHV3-57-201ENST00000520143 TNIKQ9UKE5 1360 aa10.62□□□□□ -0.71
IGHV3-57-201ENST00000520143 NESP48681 1621 aa10.62□□□□□ -0.71
IGHV3-57-201ENST00000520143 DNMBPQ6XZF7 1577 aa10.61□□□□□ -0.71
IGHV3-57-201ENST00000520143 ZNF219Q9P2Y4 722 aaPredicted RBP10.61□□□□□ -0.71
IGHV3-57-201ENST00000520143 KIF27Q86VH2 1401 aa10.58□□□□□ -0.72
IGHV3-57-201ENST00000520143 PDS5BQ9NTI5 1447 aa10.58□□□□□ -0.72
IGHV3-57-201ENST00000520143 DSG3P32926 999 aa10.58□□□□□ -0.72
IGHV3-57-201ENST00000520143 FGD5Q6ZNL6 1462 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms