RNA–Protein interactions for RNA: ENST00000412722.1

LINC00427-201, long intergenic non-protein coding RNA 427, humanhuman

TSL 2 BASIC

Gene LINC00427, Length 430 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00427-201ENST00000412722 CHIC1Q5VXU3 224 aa16.39■□□□□ 0.21
LINC00427-201ENST00000412722 AEBP2Q6ZN18 517 aaPredicted RBP16.09■□□□□ 0.17
LINC00427-201ENST00000412722 PHF23Q9BUL5 403 aaPredicted RBP14.43□□□□□ -0.1
LINC00427-201ENST00000412722 SENP3Q9H4L4 574 aaPredicted RBP13.62□□□□□ -0.23
LINC00427-201ENST00000412722 PLPPR3Q6T4P5 718 aa13.61□□□□□ -0.23
LINC00427-201ENST00000412722 ADRA2BP18089 450 aa12.64□□□□□ -0.39
LINC00427-201ENST00000412722 FOXD1Q16676 465 aa12.52□□□□□ -0.41
LINC00427-201ENST00000412722 PPP6R1Q9UPN7 881 aa12.51□□□□□ -0.41
LINC00427-201ENST00000412722 KCNA4P22459 653 aa12.46□□□□□ -0.41
LINC00427-201ENST00000412722 EHMT2Q96KQ7 1210 aa12.35□□□□□ -0.43
LINC00427-201ENST00000412722 PPP4R3CPQ6ZMV5 832 aa12.05□□□□□ -0.48
LINC00427-201ENST00000412722 SLC4A1APQ9BWU0 796 aaKnown RBP12.01□□□□□ -0.49
LINC00427-201ENST00000412722 PIAS4Q8N2W9 510 aaPredicted RBP11.97□□□□□ -0.49
LINC00427-201ENST00000412722 NCBP3Q53F19 620 aaKnown RBP11.96□□□□□ -0.49
LINC00427-201ENST00000412722 CSRNP3Q8WYN3 585 aa11.94□□□□□ -0.5
LINC00427-201ENST00000412722 NPM3O75607 178 aaKnown RBP11.73□□□□□ -0.53
LINC00427-201ENST00000412722 CNKSR2Q8WXI2 1034 aa11.6□□□□□ -0.55
LINC00427-201ENST00000412722 SCAF1Q9H7N4 1312 aaKnown RBP11.57□□□□□ -0.56
LINC00427-201ENST00000412722 ZBTB22O15209 634 aa11.45□□□□□ -0.58
LINC00427-201ENST00000412722 DNAJC5BQ9UF47 199 aa11.38□□□□□ -0.59
LINC00427-201ENST00000412722 MSH5O43196 834 aa11.35□□□□□ -0.59
LINC00427-201ENST00000412722 FOXD4L1Q9NU39 408 aa11.34□□□□□ -0.59
LINC00427-201ENST00000412722 RNF216Q9NWF9 866 aaPredicted RBP11.21□□□□□ -0.61
LINC00427-201ENST00000412722 MAPK8IP2Q13387 824 aaPredicted RBP11.18□□□□□ -0.62
LINC00427-201ENST00000412722 HOXD11P31277 338 aaPredicted RBP11□□□□□ -0.65
LINC00427-201ENST00000412722 AMER1Q5JTC6 1135 aaPredicted RBP10.97□□□□□ -0.65
LINC00427-201ENST00000412722 DMRT2Q9Y5R5 561 aa10.97□□□□□ -0.65
LINC00427-201ENST00000412722 SLC24A1O60721 1099 aa10.92□□□□□ -0.66
LINC00427-201ENST00000412722 SLC4A2P04920 1241 aa10.91□□□□□ -0.66
LINC00427-201ENST00000412722 ATXN8OSP0DMR3 200 aa10.91□□□□□ -0.66
LINC00427-201ENST00000412722 RTN4Q9NQC3 1192 aaKnown RBP10.89□□□□□ -0.67
LINC00427-201ENST00000412722 MYCNP04198 464 aaPredicted RBP10.86□□□□□ -0.67
LINC00427-201ENST00000412722 FKBP8Q14318 412 aa10.76□□□□□ -0.69
LINC00427-201ENST00000412722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.51□□□□□ -0.73
LINC00427-201ENST00000412722 HNRNPUL2Q1KMD3 747 aaKnown RBP10.51□□□□□ -0.73
LINC00427-201ENST00000412722 SAMD1Q6SPF0 538 aaPredicted RBP10.49□□□□□ -0.73
LINC00427-201ENST00000412722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.46□□□□□ -0.73
LINC00427-201ENST00000412722 ATF5Q9Y2D1 282 aaPredicted RBP10.45□□□□□ -0.74
LINC00427-201ENST00000412722 DCAF8L1A6NGE4 600 aa10.41□□□□□ -0.74
LINC00427-201ENST00000412722 U3KPZ7 1027 aaPredicted RBP10.35□□□□□ -0.75
LINC00427-201ENST00000412722 APLP2Q06481 763 aa10.27□□□□□ -0.77
LINC00427-201ENST00000412722 FBXO3Q9UK99 471 aa10.27□□□□□ -0.77
LINC00427-201ENST00000412722 ZNF219Q9P2Y4 722 aaPredicted RBP10.26□□□□□ -0.77
LINC00427-201ENST00000412722 SPDYE4A6NLX3 237 aa10.16□□□□□ -0.78
LINC00427-201ENST00000412722 PROM2Q8N271 834 aa10.1□□□□□ -0.79
LINC00427-201ENST00000412722 PLCB2Q00722 1185 aa10.08□□□□□ -0.8
LINC00427-201ENST00000412722 VASPP50552 380 aaPredicted RBP10.06□□□□□ -0.8
LINC00427-201ENST00000412722 FBLN2P98095 1184 aa10.05□□□□□ -0.8
LINC00427-201ENST00000412722 MKRN4PQ13434 485 aaPredicted RBP10.05□□□□□ -0.8
LINC00427-201ENST00000412722 IFNLR1Q8IU57 520 aaPredicted RBP9.96□□□□□ -0.82
LINC00427-201ENST00000412722 DCAF8L2P0C7V8 631 aa9.91□□□□□ -0.82
LINC00427-201ENST00000412722 HAP1P54257 671 aaPredicted RBP9.91□□□□□ -0.82
LINC00427-201ENST00000412722 TRHP20396 242 aaPredicted RBP9.9□□□□□ -0.82
LINC00427-201ENST00000412722 POLA2Q14181 598 aa9.89□□□□□ -0.83
LINC00427-201ENST00000412722 PKD2Q13563 968 aa9.87□□□□□ -0.83
LINC00427-201ENST00000412722 SPINK5Q9NQ38 1064 aaPredicted RBP9.85□□□□□ -0.83
LINC00427-201ENST00000412722 ZBTB12Q9Y330 459 aaPredicted RBP9.85□□□□□ -0.83
LINC00427-201ENST00000412722 VSIG10Q8N0Z9 540 aa9.83□□□□□ -0.84
LINC00427-201ENST00000412722 BCANQ96GW7 911 aa9.83□□□□□ -0.84
LINC00427-201ENST00000412722 CAPN15O75808 1086 aa9.8□□□□□ -0.84
LINC00427-201ENST00000412722 SPOCK2Q92563 424 aa9.77□□□□□ -0.85
LINC00427-201ENST00000412722 RNF39Q9H2S5 420 aa9.76□□□□□ -0.85
LINC00427-201ENST00000412722 KLHL34Q8N239 644 aa9.75□□□□□ -0.85
LINC00427-201ENST00000412722 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.75□□□□□ -0.85
LINC00427-201ENST00000412722 BBXQ8WY36 941 aaPredicted RBP9.74□□□□□ -0.85
LINC00427-201ENST00000412722 STAG3Q9UJ98 1225 aa9.72□□□□□ -0.85
LINC00427-201ENST00000412722 ECM2O94769 699 aaPredicted RBP9.71□□□□□ -0.86
LINC00427-201ENST00000412722 C1QBPQ07021 282 aaKnown RBP9.71□□□□□ -0.86
LINC00427-201ENST00000412722 POTEDQ86YR6 584 aa9.7□□□□□ -0.86
LINC00427-201ENST00000412722 TAOK2Q9UL54 1235 aa9.67□□□□□ -0.86
LINC00427-201ENST00000412722 ZNF692Q9BU19 519 aaPredicted RBP9.65□□□□□ -0.86
LINC00427-201ENST00000412722 ABCB7O75027 752 aa9.64□□□□□ -0.87
LINC00427-201ENST00000412722 PAXIP1Q6ZW49 1069 aaPredicted RBP9.63□□□□□ -0.87
LINC00427-201ENST00000412722 PLCD3Q8N3E9 789 aa9.63□□□□□ -0.87
LINC00427-201ENST00000412722 NPM1P06748 294 aaKnown RBP eCLIP9.62□□□□□ -0.87
LINC00427-201ENST00000412722 SPDYE2BA6NHP3 402 aa9.61□□□□□ -0.87
LINC00427-201ENST00000412722 SPDYE6P0CI01 402 aa9.61□□□□□ -0.87
LINC00427-201ENST00000412722 SPDYE2Q495Y8 402 aa9.61□□□□□ -0.87
LINC00427-201ENST00000412722 PRKCSHP14314 528 aaPredicted RBP9.6□□□□□ -0.87
LINC00427-201ENST00000412722 CFAP44Q96MT7 982 aa9.6□□□□□ -0.87
LINC00427-201ENST00000412722 KDM2AQ9Y2K7 1162 aa9.6□□□□□ -0.87
LINC00427-201ENST00000412722 SSUH2Q9Y2M2 353 aa9.59□□□□□ -0.87
LINC00427-201ENST00000412722 RGL2O15211 777 aa9.57□□□□□ -0.88
LINC00427-201ENST00000412722 SPRYD3Q8NCJ5 442 aa9.57□□□□□ -0.88
LINC00427-201ENST00000412722 MIER1Q8N108 512 aa9.56□□□□□ -0.88
LINC00427-201ENST00000412722 ZBTB47Q9UFB7 747 aaPredicted RBP9.54□□□□□ -0.88
LINC00427-201ENST00000412722 PABPN1Q86U42 306 aaKnown RBP eCLIP9.53□□□□□ -0.88
LINC00427-201ENST00000412722 PLEKHG5O94827 1062 aa9.52□□□□□ -0.89
LINC00427-201ENST00000412722 OSCARQ8IYS5 282 aa9.52□□□□□ -0.89
LINC00427-201ENST00000412722 DSG3P32926 999 aa9.5□□□□□ -0.89
LINC00427-201ENST00000412722 TPRNQ4KMQ1 711 aa9.5□□□□□ -0.89
LINC00427-201ENST00000412722 TRIM41Q8WV44 630 aa9.5□□□□□ -0.89
LINC00427-201ENST00000412722 CIZ1Q9ULV3 898 aaPredicted RBP9.48□□□□□ -0.89
LINC00427-201ENST00000412722 CHGAP10645 457 aaKnown RBP9.47□□□□□ -0.89
LINC00427-201ENST00000412722 TSHZ2Q9NRE2 1034 aa9.47□□□□□ -0.89
LINC00427-201ENST00000412722 HS6ST3Q8IZP7 471 aa9.4□□□□□ -0.9
LINC00427-201ENST00000412722 DNAJC5Q9H3Z4 198 aa9.4□□□□□ -0.9
LINC00427-201ENST00000412722 NBR1Q14596 966 aa9.36□□□□□ -0.91
LINC00427-201ENST00000412722 GSE1Q14687 1217 aa9.36□□□□□ -0.91
LINC00427-201ENST00000412722 RNF25Q96BH1 459 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms