RNA–Protein interactions for RNA: ENST00000369098.3

C1orf54-201, Transcript of chromosome 1 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C1orf54, Length 418 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf54-201ENST00000369098 AEBP2Q6ZN18 517 aaPredicted RBP17.11■□□□□ 0.33
C1orf54-201ENST00000369098 CHIC1Q5VXU3 224 aa16.21■□□□□ 0.19
C1orf54-201ENST00000369098 SENP3Q9H4L4 574 aaPredicted RBP14.79□□□□□ -0.04
C1orf54-201ENST00000369098 PHF23Q9BUL5 403 aaPredicted RBP14.5□□□□□ -0.09
C1orf54-201ENST00000369098 FOXD1Q16676 465 aa13.69□□□□□ -0.22
C1orf54-201ENST00000369098 MSH5O43196 834 aa13.01□□□□□ -0.33
C1orf54-201ENST00000369098 PLPPR3Q6T4P5 718 aa12.95□□□□□ -0.34
C1orf54-201ENST00000369098 POTEDQ86YR6 584 aa12.82□□□□□ -0.36
C1orf54-201ENST00000369098 PIAS4Q8N2W9 510 aaPredicted RBP12.79□□□□□ -0.36
C1orf54-201ENST00000369098 PPP6R1Q9UPN7 881 aa12.62□□□□□ -0.39
C1orf54-201ENST00000369098 ADRA2BP18089 450 aa12.59□□□□□ -0.39
C1orf54-201ENST00000369098 NISCHQ9Y2I1 1504 aa11.8□□□□□ -0.52
C1orf54-201ENST00000369098 SCAF1Q9H7N4 1312 aaKnown RBP11.75□□□□□ -0.53
C1orf54-201ENST00000369098 DMRT2Q9Y5R5 561 aa11.67□□□□□ -0.54
C1orf54-201ENST00000369098 MAPK8IP2Q13387 824 aaPredicted RBP11.58□□□□□ -0.56
C1orf54-201ENST00000369098 PPP4R3CPQ6ZMV5 832 aa11.26□□□□□ -0.61
C1orf54-201ENST00000369098 HOXD11P31277 338 aaPredicted RBP11.2□□□□□ -0.62
C1orf54-201ENST00000369098 CACNB1Q02641 598 aaPredicted RBP11.19□□□□□ -0.62
C1orf54-201ENST00000369098 DCAF8L1A6NGE4 600 aa11.15□□□□□ -0.62
C1orf54-201ENST00000369098 CNKSR2Q8WXI2 1034 aa11.15□□□□□ -0.62
C1orf54-201ENST00000369098 RNF216Q9NWF9 866 aaPredicted RBP11.09□□□□□ -0.63
C1orf54-201ENST00000369098 RNF39Q9H2S5 420 aa11.02□□□□□ -0.65
C1orf54-201ENST00000369098 DNAJC5BQ9UF47 199 aa10.96□□□□□ -0.65
C1orf54-201ENST00000369098 C1QBPQ07021 282 aaKnown RBP10.92□□□□□ -0.66
C1orf54-201ENST00000369098 NCBP3Q53F19 620 aaKnown RBP10.91□□□□□ -0.66
C1orf54-201ENST00000369098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.67□□□□□ -0.7
C1orf54-201ENST00000369098 ABCC9O60706 1549 aa10.63□□□□□ -0.71
C1orf54-201ENST00000369098 NPM3O75607 178 aaKnown RBP10.6□□□□□ -0.71
C1orf54-201ENST00000369098 CCDC180Q9P1Z9 1646 aa10.57□□□□□ -0.72
C1orf54-201ENST00000369098 U3KPZ7 1027 aaPredicted RBP10.37□□□□□ -0.75
C1orf54-201ENST00000369098 CAPN15O75808 1086 aa10.28□□□□□ -0.76
C1orf54-201ENST00000369098 APLP2Q06481 763 aa10.28□□□□□ -0.76
C1orf54-201ENST00000369098 DSG3P32926 999 aa10.25□□□□□ -0.77
C1orf54-201ENST00000369098 KCNA4P22459 653 aa10.22□□□□□ -0.77
C1orf54-201ENST00000369098 SPINK5Q9NQ38 1064 aaPredicted RBP10.21□□□□□ -0.77
C1orf54-201ENST00000369098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.2□□□□□ -0.78
C1orf54-201ENST00000369098 HNRNPUL2Q1KMD3 747 aaKnown RBP10.2□□□□□ -0.78
C1orf54-201ENST00000369098 SLC4A2P04920 1241 aa10.14□□□□□ -0.79
C1orf54-201ENST00000369098 ZNF219Q9P2Y4 722 aaPredicted RBP10.14□□□□□ -0.79
C1orf54-201ENST00000369098 RB1CC1Q8TDY2 1594 aa10.1□□□□□ -0.79
C1orf54-201ENST00000369098 SAMD1Q6SPF0 538 aaPredicted RBP10.09□□□□□ -0.79
C1orf54-201ENST00000369098 DCAF8L2P0C7V8 631 aa10.07□□□□□ -0.8
C1orf54-201ENST00000369098 TRHP20396 242 aaPredicted RBP10.05□□□□□ -0.8
C1orf54-201ENST00000369098 POTEHQ6S545 545 aa10.05□□□□□ -0.8
C1orf54-201ENST00000369098 NACADO15069 1562 aa10.01□□□□□ -0.81
C1orf54-201ENST00000369098 ABCB7O75027 752 aa9.95□□□□□ -0.82
C1orf54-201ENST00000369098 PABPN1Q86U42 306 aaKnown RBP eCLIP9.91□□□□□ -0.82
C1orf54-201ENST00000369098 RBM42Q9BTD8 480 aaKnown RBP9.91□□□□□ -0.82
C1orf54-201ENST00000369098 MYCNP04198 464 aaPredicted RBP9.89□□□□□ -0.83
C1orf54-201ENST00000369098 MYO15BQ96JP2 1530 aa9.84□□□□□ -0.83
C1orf54-201ENST00000369098 ZCCHC6Q5VYS8 1495 aaKnown RBP9.79□□□□□ -0.84
C1orf54-201ENST00000369098 POLA2Q14181 598 aa9.77□□□□□ -0.85
C1orf54-201ENST00000369098 UNC13AQ9UPW8 1703 aa9.76□□□□□ -0.85
C1orf54-201ENST00000369098 BICRAQ9NZM4 1560 aa9.74□□□□□ -0.85
C1orf54-201ENST00000369098 DCAF1Q9Y4B6 1507 aa9.72□□□□□ -0.85
C1orf54-201ENST00000369098 SLC4A1APQ9BWU0 796 aaKnown RBP9.7□□□□□ -0.86
C1orf54-201ENST00000369098 ZBTB12Q9Y330 459 aaPredicted RBP9.7□□□□□ -0.86
C1orf54-201ENST00000369098 SCRIBQ14160 1630 aa9.69□□□□□ -0.86
C1orf54-201ENST00000369098 FOXD4L1Q9NU39 408 aa9.69□□□□□ -0.86
C1orf54-201ENST00000369098 SHROOM4Q9ULL8 1493 aa9.66□□□□□ -0.86
C1orf54-201ENST00000369098 CHRDL2Q6WN34 429 aa9.65□□□□□ -0.86
C1orf54-201ENST00000369098 AKT1S1Q96B36 256 aa9.6□□□□□ -0.87
C1orf54-201ENST00000369098 CECR2Q9BXF3 1484 aa9.58□□□□□ -0.88
C1orf54-201ENST00000369098 CC2D2AQ9P2K1 1620 aa9.56□□□□□ -0.88
C1orf54-201ENST00000369098 EIF4G1Q04637 1599 aaKnown RBP9.54□□□□□ -0.88
C1orf54-201ENST00000369098 ATF5Q9Y2D1 282 aaPredicted RBP9.51□□□□□ -0.89
C1orf54-201ENST00000369098 ATXN8OSP0DMR3 200 aa9.49□□□□□ -0.89
C1orf54-201ENST00000369098 REM2Q8IYK8 340 aaPredicted RBP9.45□□□□□ -0.9
C1orf54-201ENST00000369098 OSCARQ8IYS5 282 aa9.42□□□□□ -0.9
C1orf54-201ENST00000369098 SP7Q8TDD2 431 aaPredicted RBP9.37□□□□□ -0.91
C1orf54-201ENST00000369098 ZBTB22O15209 634 aa9.35□□□□□ -0.91
C1orf54-201ENST00000369098 FBLN2P98095 1184 aa9.35□□□□□ -0.91
C1orf54-201ENST00000369098 PIP4P2Q8N4L2 257 aa9.35□□□□□ -0.91
C1orf54-201ENST00000369098 SPDYE2BA6NHP3 402 aa9.33□□□□□ -0.92
C1orf54-201ENST00000369098 SPDYE6P0CI01 402 aa9.33□□□□□ -0.92
C1orf54-201ENST00000369098 SPDYE2Q495Y8 402 aa9.33□□□□□ -0.92
C1orf54-201ENST00000369098 PITPNM1O00562 1244 aa9.32□□□□□ -0.92
C1orf54-201ENST00000369098 FXR2P51116 673 aaKnown RBP eCLIP9.31□□□□□ -0.92
C1orf54-201ENST00000369098 HAX1O00165 279 aa9.26□□□□□ -0.93
C1orf54-201ENST00000369098 NCAPD3P42695 1498 aa9.23□□□□□ -0.93
C1orf54-201ENST00000369098 ERCC6Q03468 1493 aa9.23□□□□□ -0.93
C1orf54-201ENST00000369098 ATAD2BQ9ULI0 1458 aa9.22□□□□□ -0.93
C1orf54-201ENST00000369098 SMARCA2P51531 1590 aa9.21□□□□□ -0.93
C1orf54-201ENST00000369098 SMARCA4P51532 1647 aa9.2□□□□□ -0.94
C1orf54-201ENST00000369098 SPDYE1Q8NFV5 336 aaPredicted RBP9.2□□□□□ -0.94
C1orf54-201ENST00000369098 HMGXB3Q12766 1538 aa9.18□□□□□ -0.94
C1orf54-201ENST00000369098 BAZ1AQ9NRL2 1556 aaPredicted RBP9.18□□□□□ -0.94
C1orf54-201ENST00000369098 BAZ1BQ9UIG0 1483 aaKnown RBP9.17□□□□□ -0.94
C1orf54-201ENST00000369098 ZNF692Q9BU19 519 aaPredicted RBP9.15□□□□□ -0.94
C1orf54-201ENST00000369098 CUX2O14529 1486 aa9.15□□□□□ -0.95
C1orf54-201ENST00000369098 SSUH2Q9Y2M2 353 aa9.13□□□□□ -0.95
C1orf54-201ENST00000369098 DNAJC5Q9H3Z4 198 aa9.12□□□□□ -0.95
C1orf54-201ENST00000369098 CLEC11AQ9Y240 323 aa9.11□□□□□ -0.95
C1orf54-201ENST00000369098 NESP48681 1621 aa9.1□□□□□ -0.95
C1orf54-201ENST00000369098 PRKAR2AP13861 404 aaKnown RBP9.1□□□□□ -0.95
C1orf54-201ENST00000369098 MKRN4PQ13434 485 aaPredicted RBP9.1□□□□□ -0.95
C1orf54-201ENST00000369098 MROH2BQ7Z745 1585 aa9.08□□□□□ -0.96
C1orf54-201ENST00000369098 PEG3Q9GZU2 1588 aa9.08□□□□□ -0.96
C1orf54-201ENST00000369098 LAMC3Q9Y6N6 1575 aa9.03□□□□□ -0.96
C1orf54-201ENST00000369098 PDS5BQ9NTI5 1447 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 2063.7 ms