Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC6.22□□□□□ -1.41
BRCA2P51587 FAM3C2-201ENST00000312214 681 ntBASIC6.22□□□□□ -1.41
BRCA2P51587 MIR133B-201ENST00000362210 119 ntBASIC6.22□□□□□ -1.41
BRCA2P51587 RPL10P10-201ENST00000403509 664 ntBASIC6.22□□□□□ -1.41
BRCA2P51587 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.22□□□□□ -1.41
BRCA2P51587 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.22□□□□□ -1.41
BRCA2P51587 AL513533.1-201ENST00000453728 415 ntBASIC6.22□□□□□ -1.41
BRCA2P51587 NDUFA12P1-201ENST00000455914 406 ntBASIC6.22□□□□□ -1.41
BRCA2P51587 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.22□□□□□ -1.41
BRCA2P51587 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.22□□□□□ -1.41
BRCA2P51587 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.22□□□□□ -1.41
BRCA2P51587 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
BRCA2P51587 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.22□□□□□ -1.41
BRCA2P51587 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BRCA2P51587 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
BRCA2P51587 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
BRCA2P51587 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
BRCA2P51587 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
BRCA2P51587 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
BRCA2P51587 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.21□□□□□ -1.41
BRCA2P51587 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
BRCA2P51587 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
BRCA2P51587 UBE2V1P14-201ENST00000415815 558 ntBASIC6.21□□□□□ -1.41
BRCA2P51587 RPL18P10-201ENST00000425606 538 ntBASIC6.21□□□□□ -1.41
BRCA2P51587 AC092106.1-201ENST00000444291 373 ntBASIC6.21□□□□□ -1.41
BRCA2P51587 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.21□□□□□ -1.41
BRCA2P51587 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.21□□□□□ -1.41
BRCA2P51587 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.21□□□□□ -1.41
BRCA2P51587 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.21□□□□□ -1.41
BRCA2P51587 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.21□□□□□ -1.41
BRCA2P51587 AC008033.2-201ENST00000542626 177 ntBASIC6.21□□□□□ -1.41
BRCA2P51587 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.21□□□□□ -1.41
BRCA2P51587 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.21□□□□□ -1.41
BRCA2P51587 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.21□□□□□ -1.41
BRCA2P51587 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.21□□□□□ -1.41
BRCA2P51587 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
BRCA2P51587 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
BRCA2P51587 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
BRCA2P51587 MASP1-203ENST00000337774 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
BRCA2P51587 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA2P51587 PDE11A-201ENST00000286063 9275 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA2P51587 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA2P51587 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA2P51587 AC005725.1-201ENST00000577346 2607 ntBASIC6.21□□□□□ -1.42
BRCA2P51587 AR-201ENST00000374690 10652 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA2P51587 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA2P51587 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA2P51587 PDE6A-201ENST00000255266 5642 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA2P51587 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
BRCA2P51587 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
BRCA2P51587 AC012512.1-201ENST00000446594 718 ntBASIC6.21□□□□□ -1.42
BRCA2P51587 AC002075.1-201ENST00000457396 676 ntBASIC6.21□□□□□ -1.42
BRCA2P51587 AC021678.3-201ENST00000517893 476 ntBASIC6.21□□□□□ -1.42
BRCA2P51587 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.21□□□□□ -1.42
BRCA2P51587 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.21□□□□□ -1.42
BRCA2P51587 AL020997.2-201ENST00000602607 184 ntBASIC6.21□□□□□ -1.42
BRCA2P51587 AL355974.3-201ENST00000617383 467 ntBASIC6.21□□□□□ -1.42
BRCA2P51587 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA2P51587 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA2P51587 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA2P51587 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.21□□□□□ -1.42
BRCA2P51587 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.42
BRCA2P51587 ARHGAP42P2-201ENST00000416089 2140 ntBASIC6.21□□□□□ -1.42
BRCA2P51587 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA2P51587 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.21□□□□□ -1.42
BRCA2P51587 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA2P51587 VIL1-201ENST00000248444 6531 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA2P51587 CNOT7P1-201ENST00000429006 852 ntBASIC6.21□□□□□ -1.42
BRCA2P51587 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.21□□□□□ -1.42
BRCA2P51587 AC078899.1-201ENST00000521432 1185 ntBASIC6.21□□□□□ -1.42
BRCA2P51587 TOMM20P2-201ENST00000540082 421 ntBASIC6.21□□□□□ -1.42
BRCA2P51587 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
BRCA2P51587 AC106730.2-201ENST00000566641 540 ntBASIC6.21□□□□□ -1.42
BRCA2P51587 AL162431.4-201ENST00000604674 411 ntBASIC6.21□□□□□ -1.42
BRCA2P51587 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.21□□□□□ -1.42
BRCA2P51587 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.21□□□□□ -1.42
BRCA2P51587 LINC00654-201ENST00000379053 6113 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA2P51587 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA2P51587 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA2P51587 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
BRCA2P51587 CLCN4-202ENST00000380833 6750 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCA2P51587 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
BRCA2P51587 TNC-203ENST00000423613 6281 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BRCA2P51587 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCA2P51587 RNA5SP515-201ENST00000364570 118 ntBASIC6.2□□□□□ -1.42
BRCA2P51587 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.2□□□□□ -1.42
BRCA2P51587 CYCSP42-201ENST00000450823 238 ntBASIC6.2□□□□□ -1.42
BRCA2P51587 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
BRCA2P51587 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.2□□□□□ -1.42
BRCA2P51587 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
BRCA2P51587 AC024940.3-201ENST00000538551 316 ntBASIC6.2□□□□□ -1.42
BRCA2P51587 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.2□□□□□ -1.42
BRCA2P51587 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.2□□□□□ -1.42
BRCA2P51587 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
BRCA2P51587 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
BRCA2P51587 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BRCA2P51587 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
BRCA2P51587 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BRCA2P51587 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCA2P51587 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms