RNA–Protein interactions for RNA: ENST00000312214.5

FAM3C2-201, Transcript of family with sequence similarity 3 member C2 (pseudogene), humanhuman

BASIC

Gene FAM3C2, Length 681 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3C2-201ENST00000312214 AEBP2Q6ZN18 517 aaPredicted RBP22.77■■□□□ 1.24
FAM3C2-201ENST00000312214 CHIC1Q5VXU3 224 aa22.35■■□□□ 1.17
FAM3C2-201ENST00000312214 PHF23Q9BUL5 403 aaPredicted RBP19.58■□□□□ 0.72
FAM3C2-201ENST00000312214 SENP3Q9H4L4 574 aaPredicted RBP19.46■□□□□ 0.71
FAM3C2-201ENST00000312214 PLPPR3Q6T4P5 718 aa18.22■□□□□ 0.51
FAM3C2-201ENST00000312214 FOXD1Q16676 465 aa17.97■□□□□ 0.47
FAM3C2-201ENST00000312214 ADRA2BP18089 450 aa17.26■□□□□ 0.35
FAM3C2-201ENST00000312214 PPP6R1Q9UPN7 881 aa17.25■□□□□ 0.35
FAM3C2-201ENST00000312214 PIAS4Q8N2W9 510 aaPredicted RBP17■□□□□ 0.31
FAM3C2-201ENST00000312214 MSH5O43196 834 aa16.68■□□□□ 0.26
FAM3C2-201ENST00000312214 POTEDQ86YR6 584 aa16.17■□□□□ 0.18
FAM3C2-201ENST00000312214 PPP4R3CPQ6ZMV5 832 aa16■□□□□ 0.15
FAM3C2-201ENST00000312214 SCAF1Q9H7N4 1312 aaKnown RBP15.95■□□□□ 0.14
FAM3C2-201ENST00000312214 NCBP3Q53F19 620 aaKnown RBP15.69■□□□□ 0.1
FAM3C2-201ENST00000312214 MAPK8IP2Q13387 824 aaPredicted RBP15.62■□□□□ 0.09
FAM3C2-201ENST00000312214 KCNA4P22459 653 aa15.61■□□□□ 0.09
FAM3C2-201ENST00000312214 CNKSR2Q8WXI2 1034 aa15.59■□□□□ 0.09
FAM3C2-201ENST00000312214 DMRT2Q9Y5R5 561 aa15.51■□□□□ 0.07
FAM3C2-201ENST00000312214 NPM3O75607 178 aaKnown RBP15.35■□□□□ 0.05
FAM3C2-201ENST00000312214 RNF216Q9NWF9 866 aaPredicted RBP15.28■□□□□ 0.04
FAM3C2-201ENST00000312214 HOXD11P31277 338 aaPredicted RBP15.19■□□□□ 0.02
FAM3C2-201ENST00000312214 DNAJC5BQ9UF47 199 aa14.97□□□□□ -0.01
FAM3C2-201ENST00000312214 SLC4A1APQ9BWU0 796 aaKnown RBP14.93□□□□□ -0.02
FAM3C2-201ENST00000312214 DCAF8L1A6NGE4 600 aa14.84□□□□□ -0.03
FAM3C2-201ENST00000312214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.51□□□□□ -0.09
FAM3C2-201ENST00000312214 EHMT2Q96KQ7 1210 aa14.49□□□□□ -0.09
FAM3C2-201ENST00000312214 SLC4A2P04920 1241 aa14.44□□□□□ -0.1
FAM3C2-201ENST00000312214 FOXD4L1Q9NU39 408 aa14.44□□□□□ -0.1
FAM3C2-201ENST00000312214 ZBTB22O15209 634 aa14.32□□□□□ -0.12
FAM3C2-201ENST00000312214 CSRNP3Q8WYN3 585 aa14.29□□□□□ -0.12
FAM3C2-201ENST00000312214 MYCNP04198 464 aaPredicted RBP14.25□□□□□ -0.13
FAM3C2-201ENST00000312214 CACNB1Q02641 598 aaPredicted RBP14.24□□□□□ -0.13
FAM3C2-201ENST00000312214 RNF39Q9H2S5 420 aa14.23□□□□□ -0.13
FAM3C2-201ENST00000312214 U3KPZ7 1027 aaPredicted RBP14.21□□□□□ -0.13
FAM3C2-201ENST00000312214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.19□□□□□ -0.14
FAM3C2-201ENST00000312214 HNRNPUL2Q1KMD3 747 aaKnown RBP14.19□□□□□ -0.14
FAM3C2-201ENST00000312214 C1QBPQ07021 282 aaKnown RBP14.12□□□□□ -0.15
FAM3C2-201ENST00000312214 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
FAM3C2-201ENST00000312214 APLP2Q06481 763 aa14.08□□□□□ -0.16
FAM3C2-201ENST00000312214 ATXN8OSP0DMR3 200 aa13.97□□□□□ -0.17
FAM3C2-201ENST00000312214 CAPN15O75808 1086 aa13.8□□□□□ -0.2
FAM3C2-201ENST00000312214 ZNF219Q9P2Y4 722 aaPredicted RBP13.8□□□□□ -0.2
FAM3C2-201ENST00000312214 SPINK5Q9NQ38 1064 aaPredicted RBP13.78□□□□□ -0.2
FAM3C2-201ENST00000312214 ATF5Q9Y2D1 282 aaPredicted RBP13.73□□□□□ -0.21
FAM3C2-201ENST00000312214 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
FAM3C2-201ENST00000312214 DSG3P32926 999 aa13.53□□□□□ -0.24
FAM3C2-201ENST00000312214 ABCB7O75027 752 aa13.49□□□□□ -0.25
FAM3C2-201ENST00000312214 POLA2Q14181 598 aa13.49□□□□□ -0.25
FAM3C2-201ENST00000312214 ZBTB12Q9Y330 459 aaPredicted RBP13.41□□□□□ -0.26
FAM3C2-201ENST00000312214 FBLN2P98095 1184 aa13.32□□□□□ -0.28
FAM3C2-201ENST00000312214 MKRN4PQ13434 485 aaPredicted RBP13.16□□□□□ -0.3
FAM3C2-201ENST00000312214 OSCARQ8IYS5 282 aa13.04□□□□□ -0.32
FAM3C2-201ENST00000312214 RBM42Q9BTD8 480 aaKnown RBP13.01□□□□□ -0.33
FAM3C2-201ENST00000312214 SPDYE2BA6NHP3 402 aa12.99□□□□□ -0.33
FAM3C2-201ENST00000312214 SPDYE6P0CI01 402 aa12.99□□□□□ -0.33
FAM3C2-201ENST00000312214 SPDYE2Q495Y8 402 aa12.99□□□□□ -0.33
FAM3C2-201ENST00000312214 SPDYE4A6NLX3 237 aa12.96□□□□□ -0.33
FAM3C2-201ENST00000312214 FKBP8Q14318 412 aa12.96□□□□□ -0.33
FAM3C2-201ENST00000312214 ZNF692Q9BU19 519 aaPredicted RBP12.91□□□□□ -0.34
FAM3C2-201ENST00000312214 SSUH2Q9Y2M2 353 aa12.84□□□□□ -0.35
FAM3C2-201ENST00000312214 AKT1S1Q96B36 256 aa12.8□□□□□ -0.36
FAM3C2-201ENST00000312214 PROM2Q8N271 834 aa12.73□□□□□ -0.37
FAM3C2-201ENST00000312214 PABPN1Q86U42 306 aaKnown RBP eCLIP12.72□□□□□ -0.37
FAM3C2-201ENST00000312214 POTEHQ6S545 545 aa12.68□□□□□ -0.38
FAM3C2-201ENST00000312214 REM2Q8IYK8 340 aaPredicted RBP12.63□□□□□ -0.39
FAM3C2-201ENST00000312214 SPDYE1Q8NFV5 336 aaPredicted RBP12.6□□□□□ -0.39
FAM3C2-201ENST00000312214 STAG3Q9UJ98 1225 aa12.6□□□□□ -0.39
FAM3C2-201ENST00000312214 FBXO3Q9UK99 471 aa12.6□□□□□ -0.39
FAM3C2-201ENST00000312214 CLEC11AQ9Y240 323 aa12.5□□□□□ -0.41
FAM3C2-201ENST00000312214 PITPNM1O00562 1244 aa12.48□□□□□ -0.41
FAM3C2-201ENST00000312214 PRR29P0C7W0 189 aa12.41□□□□□ -0.42
FAM3C2-201ENST00000312214 CHRDL2Q6WN34 429 aa12.39□□□□□ -0.43
FAM3C2-201ENST00000312214 VASPP50552 380 aaPredicted RBP12.35□□□□□ -0.43
FAM3C2-201ENST00000312214 PLEKHG5O94827 1062 aa12.34□□□□□ -0.43
FAM3C2-201ENST00000312214 PLCD3Q8N3E9 789 aa12.3□□□□□ -0.44
FAM3C2-201ENST00000312214 MIER1Q8N108 512 aa12.29□□□□□ -0.44
FAM3C2-201ENST00000312214 FXR2P51116 673 aaKnown RBP eCLIP12.25□□□□□ -0.45
FAM3C2-201ENST00000312214 ZBTB47Q9UFB7 747 aaPredicted RBP12.24□□□□□ -0.45
FAM3C2-201ENST00000312214 PIP4P2Q8N4L2 257 aa12.2□□□□□ -0.46
FAM3C2-201ENST00000312214 CREBZFQ9NS37 354 aa12.2□□□□□ -0.46
FAM3C2-201ENST00000312214 PRKAR2AP13861 404 aaKnown RBP12.18□□□□□ -0.46
FAM3C2-201ENST00000312214 KLHL34Q8N239 644 aa12.16□□□□□ -0.46
FAM3C2-201ENST00000312214 CHADLQ6NUI6 762 aa12.13□□□□□ -0.47
FAM3C2-201ENST00000312214 IFNLR1Q8IU57 520 aaPredicted RBP12.13□□□□□ -0.47
FAM3C2-201ENST00000312214 NPM1P06748 294 aaKnown RBP eCLIP12.1□□□□□ -0.47
FAM3C2-201ENST00000312214 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
FAM3C2-201ENST00000312214 MNX1P50219 401 aaPredicted RBP12.06□□□□□ -0.48
FAM3C2-201ENST00000312214 SPOCK2Q92563 424 aa12.06□□□□□ -0.48
FAM3C2-201ENST00000312214 NISCHQ9Y2I1 1504 aa11.97□□□□□ -0.49
FAM3C2-201ENST00000312214 NUBP1P53384 320 aa11.93□□□□□ -0.5
FAM3C2-201ENST00000312214 FAM212AQ96EL1 285 aa11.93□□□□□ -0.5
FAM3C2-201ENST00000312214 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
FAM3C2-201ENST00000312214 AMER1Q5JTC6 1135 aaPredicted RBP11.92□□□□□ -0.5
FAM3C2-201ENST00000312214 GSE1Q14687 1217 aa11.9□□□□□ -0.5
FAM3C2-201ENST00000312214 SP7Q8TDD2 431 aaPredicted RBP11.9□□□□□ -0.5
FAM3C2-201ENST00000312214 HAX1O00165 279 aa11.88□□□□□ -0.51
FAM3C2-201ENST00000312214 RASEFQ8IZ41 740 aa11.87□□□□□ -0.51
FAM3C2-201ENST00000312214 CD44P16070 742 aaKnown RBP11.85□□□□□ -0.51
FAM3C2-201ENST00000312214 DCAF8Q5TAQ9 597 aa11.85□□□□□ -0.51
FAM3C2-201ENST00000312214 CIZ1Q9ULV3 898 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms