RNA–Protein interactions for RNA: ENST00000546254.3

PRB1-204, Transcript of proline rich protein BstNI subfamily 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRB1, Length 1,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRB1-204ENST00000546254 AEBP2Q6ZN18 517 aaPredicted RBP26.34■■□□□ 1.81
PRB1-204ENST00000546254 CHIC1Q5VXU3 224 aa24.72■■□□□ 1.55
PRB1-204ENST00000546254 SENP3Q9H4L4 574 aaPredicted RBP22.62■■□□□ 1.21
PRB1-204ENST00000546254 PHF23Q9BUL5 403 aaPredicted RBP22.24■■□□□ 1.15
PRB1-204ENST00000546254 FOXD1Q16676 465 aa21.09■□□□□ 0.97
PRB1-204ENST00000546254 POTEDQ86YR6 584 aa20.16■□□□□ 0.82
PRB1-204ENST00000546254 MSH5O43196 834 aa19.95■□□□□ 0.78
PRB1-204ENST00000546254 PIAS4Q8N2W9 510 aaPredicted RBP19.68■□□□□ 0.74
PRB1-204ENST00000546254 PLPPR3Q6T4P5 718 aa19.54■□□□□ 0.72
PRB1-204ENST00000546254 PPP6R1Q9UPN7 881 aa19.36■□□□□ 0.69
PRB1-204ENST00000546254 ADRA2BP18089 450 aa19.32■□□□□ 0.68
PRB1-204ENST00000546254 MAPK8IP2Q13387 824 aaPredicted RBP17.86■□□□□ 0.45
PRB1-204ENST00000546254 DMRT2Q9Y5R5 561 aa17.83■□□□□ 0.44
PRB1-204ENST00000546254 SCAF1Q9H7N4 1312 aaKnown RBP17.74■□□□□ 0.43
PRB1-204ENST00000546254 CACNB1Q02641 598 aaPredicted RBP17.42■□□□□ 0.38
PRB1-204ENST00000546254 DCAF8L1A6NGE4 600 aa17.28■□□□□ 0.36
PRB1-204ENST00000546254 PPP4R3CPQ6ZMV5 832 aa17.06■□□□□ 0.32
PRB1-204ENST00000546254 HOXD11P31277 338 aaPredicted RBP16.98■□□□□ 0.31
PRB1-204ENST00000546254 RNF39Q9H2S5 420 aa16.93■□□□□ 0.3
PRB1-204ENST00000546254 CNKSR2Q8WXI2 1034 aa16.84■□□□□ 0.29
PRB1-204ENST00000546254 RNF216Q9NWF9 866 aaPredicted RBP16.77■□□□□ 0.28
PRB1-204ENST00000546254 C1QBPQ07021 282 aaKnown RBP16.69■□□□□ 0.26
PRB1-204ENST00000546254 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
PRB1-204ENST00000546254 NCBP3Q53F19 620 aaKnown RBP16.32■□□□□ 0.2
PRB1-204ENST00000546254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.3■□□□□ 0.2
PRB1-204ENST00000546254 NPM3O75607 178 aaKnown RBP16.03■□□□□ 0.16
PRB1-204ENST00000546254 CAPN15O75808 1086 aa15.82■□□□□ 0.12
PRB1-204ENST00000546254 U3KPZ7 1027 aaPredicted RBP15.82■□□□□ 0.12
PRB1-204ENST00000546254 SPINK5Q9NQ38 1064 aaPredicted RBP15.75■□□□□ 0.11
PRB1-204ENST00000546254 POTEHQ6S545 545 aa15.74■□□□□ 0.11
PRB1-204ENST00000546254 DSG3P32926 999 aa15.73■□□□□ 0.11
PRB1-204ENST00000546254 TRHP20396 242 aaPredicted RBP15.46■□□□□ 0.07
PRB1-204ENST00000546254 APLP2Q06481 763 aa15.43■□□□□ 0.06
PRB1-204ENST00000546254 ABCB7O75027 752 aa15.39■□□□□ 0.05
PRB1-204ENST00000546254 ZNF219Q9P2Y4 722 aaPredicted RBP15.39■□□□□ 0.05
PRB1-204ENST00000546254 SLC4A2P04920 1241 aa15.38■□□□□ 0.05
PRB1-204ENST00000546254 KCNA4P22459 653 aa15.35■□□□□ 0.05
PRB1-204ENST00000546254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.3■□□□□ 0.04
PRB1-204ENST00000546254 HNRNPUL2Q1KMD3 747 aaKnown RBP15.3■□□□□ 0.04
PRB1-204ENST00000546254 SAMD1Q6SPF0 538 aaPredicted RBP15.18■□□□□ 0.02
PRB1-204ENST00000546254 RBM42Q9BTD8 480 aaKnown RBP15.09■□□□□ 0.01
PRB1-204ENST00000546254 POLA2Q14181 598 aa14.9□□□□□ -0.02
PRB1-204ENST00000546254 CHRDL2Q6WN34 429 aa14.89□□□□□ -0.03
PRB1-204ENST00000546254 MYCNP04198 464 aaPredicted RBP14.87□□□□□ -0.03
PRB1-204ENST00000546254 AKT1S1Q96B36 256 aa14.61□□□□□ -0.07
PRB1-204ENST00000546254 ZBTB12Q9Y330 459 aaPredicted RBP14.58□□□□□ -0.08
PRB1-204ENST00000546254 SP7Q8TDD2 431 aaPredicted RBP14.56□□□□□ -0.08
PRB1-204ENST00000546254 ATF5Q9Y2D1 282 aaPredicted RBP14.5□□□□□ -0.09
PRB1-204ENST00000546254 FOXD4L1Q9NU39 408 aa14.48□□□□□ -0.09
PRB1-204ENST00000546254 REM2Q8IYK8 340 aaPredicted RBP14.46□□□□□ -0.09
PRB1-204ENST00000546254 OSCARQ8IYS5 282 aa14.45□□□□□ -0.1
PRB1-204ENST00000546254 SLC4A1APQ9BWU0 796 aaKnown RBP14.45□□□□□ -0.1
PRB1-204ENST00000546254 PIP4P2Q8N4L2 257 aa14.42□□□□□ -0.1
PRB1-204ENST00000546254 HAX1O00165 279 aa14.36□□□□□ -0.11
PRB1-204ENST00000546254 PITPNM1O00562 1244 aa14.32□□□□□ -0.12
PRB1-204ENST00000546254 FXR2P51116 673 aaKnown RBP eCLIP14.25□□□□□ -0.13
PRB1-204ENST00000546254 SPDYE2BA6NHP3 402 aa14.08□□□□□ -0.16
PRB1-204ENST00000546254 SPDYE6P0CI01 402 aa14.08□□□□□ -0.16
PRB1-204ENST00000546254 FBLN2P98095 1184 aa14.08□□□□□ -0.16
PRB1-204ENST00000546254 SPDYE2Q495Y8 402 aa14.08□□□□□ -0.16
PRB1-204ENST00000546254 ZBTB22O15209 634 aa14.05□□□□□ -0.16
PRB1-204ENST00000546254 ATXN8OSP0DMR3 200 aa14.04□□□□□ -0.16
PRB1-204ENST00000546254 EVX2Q03828 476 aa14.03□□□□□ -0.16
PRB1-204ENST00000546254 CLEC11AQ9Y240 323 aa14.02□□□□□ -0.17
PRB1-204ENST00000546254 PRKAR2AP13861 404 aaKnown RBP13.99□□□□□ -0.17
PRB1-204ENST00000546254 SPDYE1Q8NFV5 336 aaPredicted RBP13.96□□□□□ -0.17
PRB1-204ENST00000546254 ZNF692Q9BU19 519 aaPredicted RBP13.87□□□□□ -0.19
PRB1-204ENST00000546254 C19orf67A6NJJ6 358 aa13.81□□□□□ -0.2
PRB1-204ENST00000546254 MKRN4PQ13434 485 aaPredicted RBP13.8□□□□□ -0.2
PRB1-204ENST00000546254 SSUH2Q9Y2M2 353 aa13.79□□□□□ -0.2
PRB1-204ENST00000546254 CHADLQ6NUI6 762 aa13.74□□□□□ -0.21
PRB1-204ENST00000546254 GABBR2O75899 941 aa13.73□□□□□ -0.21
PRB1-204ENST00000546254 PRR29P0C7W0 189 aa13.69□□□□□ -0.22
PRB1-204ENST00000546254 LHX8Q68G74 356 aa13.66□□□□□ -0.22
PRB1-204ENST00000546254 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
PRB1-204ENST00000546254 CD44P16070 742 aaKnown RBP13.53□□□□□ -0.24
PRB1-204ENST00000546254 FARP1Q9Y4F1 1045 aaPredicted RBP13.46□□□□□ -0.25
PRB1-204ENST00000546254 POTEIP0CG38 1075 aa13.39□□□□□ -0.27
PRB1-204ENST00000546254 CLCN6P51797 869 aa13.38□□□□□ -0.27
PRB1-204ENST00000546254 DCBLD2Q96PD2 775 aa13.36□□□□□ -0.27
PRB1-204ENST00000546254 ZRANB1Q9UGI0 708 aa13.27□□□□□ -0.29
PRB1-204ENST00000546254 ZNF579Q8NAF0 562 aaKnown RBP13.24□□□□□ -0.29
PRB1-204ENST00000546254 PLSCR2Q9NRY7 297 aa13.22□□□□□ -0.29
PRB1-204ENST00000546254 STAG3Q9UJ98 1225 aa13.19□□□□□ -0.3
PRB1-204ENST00000546254 CREBZFQ9NS37 354 aa13.17□□□□□ -0.3
PRB1-204ENST00000546254 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
PRB1-204ENST00000546254 PAK3O75914 559 aaPredicted RBP13.13□□□□□ -0.31
PRB1-204ENST00000546254 CSRNP3Q8WYN3 585 aa13.05□□□□□ -0.32
PRB1-204ENST00000546254 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.33
PRB1-204ENST00000546254 PHF12Q96QT6 1004 aa13.02□□□□□ -0.33
PRB1-204ENST00000546254 OTUD5Q96G74 571 aa13.01□□□□□ -0.33
PRB1-204ENST00000546254 NPM1P06748 294 aaKnown RBP eCLIP13□□□□□ -0.33
PRB1-204ENST00000546254 POTEB2H3BUK9 544 aa12.96□□□□□ -0.33
PRB1-204ENST00000546254 POTEMA6NI47 508 aa12.9□□□□□ -0.34
PRB1-204ENST00000546254 PELP1Q8IZL8 1130 aaKnown RBP12.87□□□□□ -0.35
PRB1-204ENST00000546254 MNX1P50219 401 aaPredicted RBP12.84□□□□□ -0.35
PRB1-204ENST00000546254 POTEGQ6S5H5 508 aa12.84□□□□□ -0.35
PRB1-204ENST00000546254 MS4A3Q96HJ5 214 aa12.84□□□□□ -0.35
PRB1-204ENST00000546254 METRNQ9UJH8 293 aa12.84□□□□□ -0.35
PRB1-204ENST00000546254 SLC39A7Q92504 469 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms