RNA–Protein interactions for RNA: ENST00000413661.1

BMS1P17-201, Transcript of BMS1, ribosome biogenesis factor pseudogene 17, humanhuman

TSL 1 (best) BASIC

Gene BMS1P17, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMS1P17-201ENST00000413661 AEBP2Q6ZN18 517 aaPredicted RBP20.83■□□□□ 0.93
BMS1P17-201ENST00000413661 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
BMS1P17-201ENST00000413661 SENP3Q9H4L4 574 aaPredicted RBP17.8■□□□□ 0.44
BMS1P17-201ENST00000413661 PHF23Q9BUL5 403 aaPredicted RBP17.55■□□□□ 0.4
BMS1P17-201ENST00000413661 FOXD1Q16676 465 aa16.55■□□□□ 0.24
BMS1P17-201ENST00000413661 PLPPR3Q6T4P5 718 aa16■□□□□ 0.15
BMS1P17-201ENST00000413661 MSH5O43196 834 aa15.51■□□□□ 0.07
BMS1P17-201ENST00000413661 PPP6R1Q9UPN7 881 aa15.5■□□□□ 0.07
BMS1P17-201ENST00000413661 PIAS4Q8N2W9 510 aaPredicted RBP15.49■□□□□ 0.07
BMS1P17-201ENST00000413661 ADRA2BP18089 450 aa15.46■□□□□ 0.07
BMS1P17-201ENST00000413661 POTEDQ86YR6 584 aa15.03■□□□□ -0
BMS1P17-201ENST00000413661 SCAF1Q9H7N4 1312 aaKnown RBP14.19□□□□□ -0.14
BMS1P17-201ENST00000413661 MAPK8IP2Q13387 824 aaPredicted RBP14.18□□□□□ -0.14
BMS1P17-201ENST00000413661 PPP4R3CPQ6ZMV5 832 aa14.11□□□□□ -0.15
BMS1P17-201ENST00000413661 DMRT2Q9Y5R5 561 aa14.11□□□□□ -0.15
BMS1P17-201ENST00000413661 KCNA4P22459 653 aa13.75□□□□□ -0.21
BMS1P17-201ENST00000413661 NCBP3Q53F19 620 aaKnown RBP13.74□□□□□ -0.21
BMS1P17-201ENST00000413661 CNKSR2Q8WXI2 1034 aa13.71□□□□□ -0.21
BMS1P17-201ENST00000413661 HOXD11P31277 338 aaPredicted RBP13.61□□□□□ -0.23
BMS1P17-201ENST00000413661 RNF216Q9NWF9 866 aaPredicted RBP13.53□□□□□ -0.24
BMS1P17-201ENST00000413661 DCAF8L1A6NGE4 600 aa13.52□□□□□ -0.25
BMS1P17-201ENST00000413661 NPM3O75607 178 aaKnown RBP13.52□□□□□ -0.25
BMS1P17-201ENST00000413661 CACNB1Q02641 598 aaPredicted RBP13.27□□□□□ -0.29
BMS1P17-201ENST00000413661 RNF39Q9H2S5 420 aa13.22□□□□□ -0.29
BMS1P17-201ENST00000413661 DNAJC5BQ9UF47 199 aa13.16□□□□□ -0.3
BMS1P17-201ENST00000413661 SLC4A1APQ9BWU0 796 aaKnown RBP13.1□□□□□ -0.31
BMS1P17-201ENST00000413661 C1QBPQ07021 282 aaKnown RBP13.04□□□□□ -0.32
BMS1P17-201ENST00000413661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.97□□□□□ -0.33
BMS1P17-201ENST00000413661 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
BMS1P17-201ENST00000413661 EHMT2Q96KQ7 1210 aa12.74□□□□□ -0.37
BMS1P17-201ENST00000413661 U3KPZ7 1027 aaPredicted RBP12.69□□□□□ -0.38
BMS1P17-201ENST00000413661 FOXD4L1Q9NU39 408 aa12.66□□□□□ -0.38
BMS1P17-201ENST00000413661 ZBTB22O15209 634 aa12.65□□□□□ -0.38
BMS1P17-201ENST00000413661 CSRNP3Q8WYN3 585 aa12.56□□□□□ -0.4
BMS1P17-201ENST00000413661 MYCNP04198 464 aaPredicted RBP12.5□□□□□ -0.41
BMS1P17-201ENST00000413661 SPINK5Q9NQ38 1064 aaPredicted RBP12.48□□□□□ -0.41
BMS1P17-201ENST00000413661 CAPN15O75808 1086 aa12.47□□□□□ -0.41
BMS1P17-201ENST00000413661 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.4□□□□□ -0.42
BMS1P17-201ENST00000413661 HNRNPUL2Q1KMD3 747 aaKnown RBP12.4□□□□□ -0.42
BMS1P17-201ENST00000413661 APLP2Q06481 763 aa12.39□□□□□ -0.43
BMS1P17-201ENST00000413661 DSG3P32926 999 aa12.38□□□□□ -0.43
BMS1P17-201ENST00000413661 SAMD1Q6SPF0 538 aaPredicted RBP12.35□□□□□ -0.43
BMS1P17-201ENST00000413661 NISCHQ9Y2I1 1504 aa12.33□□□□□ -0.44
BMS1P17-201ENST00000413661 TRHP20396 242 aaPredicted RBP12.29□□□□□ -0.44
BMS1P17-201ENST00000413661 ZNF219Q9P2Y4 722 aaPredicted RBP12.29□□□□□ -0.44
BMS1P17-201ENST00000413661 ATXN8OSP0DMR3 200 aa12.21□□□□□ -0.45
BMS1P17-201ENST00000413661 ABCB7O75027 752 aa12.18□□□□□ -0.46
BMS1P17-201ENST00000413661 ATF5Q9Y2D1 282 aaPredicted RBP12.17□□□□□ -0.46
BMS1P17-201ENST00000413661 POLA2Q14181 598 aa11.96□□□□□ -0.49
BMS1P17-201ENST00000413661 RBM42Q9BTD8 480 aaKnown RBP11.85□□□□□ -0.51
BMS1P17-201ENST00000413661 POTEHQ6S545 545 aa11.79□□□□□ -0.52
BMS1P17-201ENST00000413661 ZBTB12Q9Y330 459 aaPredicted RBP11.77□□□□□ -0.53
BMS1P17-201ENST00000413661 FBLN2P98095 1184 aa11.67□□□□□ -0.54
BMS1P17-201ENST00000413661 MKRN4PQ13434 485 aaPredicted RBP11.63□□□□□ -0.55
BMS1P17-201ENST00000413661 OSCARQ8IYS5 282 aa11.58□□□□□ -0.56
BMS1P17-201ENST00000413661 AKT1S1Q96B36 256 aa11.57□□□□□ -0.56
BMS1P17-201ENST00000413661 CHRDL2Q6WN34 429 aa11.56□□□□□ -0.56
BMS1P17-201ENST00000413661 REM2Q8IYK8 340 aaPredicted RBP11.46□□□□□ -0.57
BMS1P17-201ENST00000413661 SPDYE2BA6NHP3 402 aa11.39□□□□□ -0.59
BMS1P17-201ENST00000413661 SPDYE6P0CI01 402 aa11.39□□□□□ -0.59
BMS1P17-201ENST00000413661 SPDYE2Q495Y8 402 aa11.39□□□□□ -0.59
BMS1P17-201ENST00000413661 SPDYE4A6NLX3 237 aa11.38□□□□□ -0.59
BMS1P17-201ENST00000413661 FKBP8Q14318 412 aa11.38□□□□□ -0.59
BMS1P17-201ENST00000413661 ZNF692Q9BU19 519 aaPredicted RBP11.36□□□□□ -0.59
BMS1P17-201ENST00000413661 PITPNM1O00562 1244 aa11.33□□□□□ -0.6
BMS1P17-201ENST00000413661 SSUH2Q9Y2M2 353 aa11.29□□□□□ -0.6
BMS1P17-201ENST00000413661 PIP4P2Q8N4L2 257 aa11.28□□□□□ -0.6
BMS1P17-201ENST00000413661 ABCC9O60706 1549 aa11.26□□□□□ -0.61
BMS1P17-201ENST00000413661 FXR2P51116 673 aaKnown RBP eCLIP11.22□□□□□ -0.61
BMS1P17-201ENST00000413661 PABPN1Q86U42 306 aaKnown RBP eCLIP11.21□□□□□ -0.61
BMS1P17-201ENST00000413661 SPDYE1Q8NFV5 336 aaPredicted RBP11.18□□□□□ -0.62
BMS1P17-201ENST00000413661 PROM2Q8N271 834 aa11.14□□□□□ -0.63
BMS1P17-201ENST00000413661 CLEC11AQ9Y240 323 aa11.14□□□□□ -0.63
BMS1P17-201ENST00000413661 CCDC180Q9P1Z9 1646 aa11.09□□□□□ -0.63
BMS1P17-201ENST00000413661 SP7Q8TDD2 431 aaPredicted RBP11.08□□□□□ -0.64
BMS1P17-201ENST00000413661 HAX1O00165 279 aa11.07□□□□□ -0.64
BMS1P17-201ENST00000413661 PRKAR2AP13861 404 aaKnown RBP11.04□□□□□ -0.64
BMS1P17-201ENST00000413661 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
BMS1P17-201ENST00000413661 PRR29P0C7W0 189 aa10.97□□□□□ -0.65
BMS1P17-201ENST00000413661 FBXO3Q9UK99 471 aa10.97□□□□□ -0.65
BMS1P17-201ENST00000413661 CHADLQ6NUI6 762 aa10.91□□□□□ -0.66
BMS1P17-201ENST00000413661 EVX2Q03828 476 aa10.9□□□□□ -0.66
BMS1P17-201ENST00000413661 C19orf67A6NJJ6 358 aa10.86□□□□□ -0.67
BMS1P17-201ENST00000413661 VASPP50552 380 aaPredicted RBP10.82□□□□□ -0.68
BMS1P17-201ENST00000413661 MIER1Q8N108 512 aa10.81□□□□□ -0.68
BMS1P17-201ENST00000413661 PLCD3Q8N3E9 789 aa10.79□□□□□ -0.68
BMS1P17-201ENST00000413661 CREBZFQ9NS37 354 aa10.77□□□□□ -0.69
BMS1P17-201ENST00000413661 FARP1Q9Y4F1 1045 aaPredicted RBP10.77□□□□□ -0.69
BMS1P17-201ENST00000413661 PLEKHG5O94827 1062 aa10.76□□□□□ -0.69
BMS1P17-201ENST00000413661 CD44P16070 742 aaKnown RBP10.7□□□□□ -0.7
BMS1P17-201ENST00000413661 GABBR2O75899 941 aa10.69□□□□□ -0.7
BMS1P17-201ENST00000413661 IFNLR1Q8IU57 520 aaPredicted RBP10.67□□□□□ -0.7
BMS1P17-201ENST00000413661 KLHL34Q8N239 644 aa10.67□□□□□ -0.7
BMS1P17-201ENST00000413661 ZBTB47Q9UFB7 747 aaPredicted RBP10.65□□□□□ -0.7
BMS1P17-201ENST00000413661 RB1CC1Q8TDY2 1594 aa10.65□□□□□ -0.71
BMS1P17-201ENST00000413661 MNX1P50219 401 aaPredicted RBP10.64□□□□□ -0.71
BMS1P17-201ENST00000413661 NPM1P06748 294 aaKnown RBP eCLIP10.6□□□□□ -0.71
BMS1P17-201ENST00000413661 CLCN6P51797 869 aa10.58□□□□□ -0.72
BMS1P17-201ENST00000413661 DCAF8L2P0C7V8 631 aa10.56□□□□□ -0.72
BMS1P17-201ENST00000413661 SPOCK2Q92563 424 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms