Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.79□□□□□ -1.32
GPC3P51654 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.79□□□□□ -1.32
GPC3P51654 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.79□□□□□ -1.32
GPC3P51654 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.79□□□□□ -1.32
GPC3P51654 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.79□□□□□ -1.32
GPC3P51654 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.79□□□□□ -1.32
GPC3P51654 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.79□□□□□ -1.32
GPC3P51654 AC008555.7-201ENST00000605008 583 ntBASIC6.79□□□□□ -1.32
GPC3P51654 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.79□□□□□ -1.32
GPC3P51654 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
GPC3P51654 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
GPC3P51654 AL353763.1-201ENST00000624467 1628 ntBASIC6.79□□□□□ -1.32
GPC3P51654 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.79□□□□□ -1.32
GPC3P51654 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
GPC3P51654 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
GPC3P51654 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
GPC3P51654 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
GPC3P51654 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
GPC3P51654 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
GPC3P51654 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.78□□□□□ -1.32
GPC3P51654 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.78□□□□□ -1.32
GPC3P51654 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
GPC3P51654 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.78□□□□□ -1.32
GPC3P51654 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
GPC3P51654 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
GPC3P51654 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
GPC3P51654 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
GPC3P51654 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
GPC3P51654 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
GPC3P51654 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
GPC3P51654 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.78□□□□□ -1.32
GPC3P51654 PSG10P-201ENST00000501199 1500 ntBASIC6.78□□□□□ -1.32
GPC3P51654 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.78□□□□□ -1.32
GPC3P51654 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.78□□□□□ -1.32
GPC3P51654 RNA5SP477-201ENST00000362639 119 ntBASIC6.78□□□□□ -1.32
GPC3P51654 RN7SKP269-201ENST00000365545 319 ntBASIC6.78□□□□□ -1.32
GPC3P51654 SUGT1P2-201ENST00000379452 992 ntBASIC6.78□□□□□ -1.32
GPC3P51654 SNORA70H-201ENST00000383910 135 ntBASIC6.78□□□□□ -1.32
GPC3P51654 SNORA70J-201ENST00000384182 135 ntBASIC6.78□□□□□ -1.32
GPC3P51654 TRAV35-201ENST00000390462 330 ntBASIC6.78□□□□□ -1.32
GPC3P51654 NPM1P38-201ENST00000403835 865 ntBASIC6.78□□□□□ -1.32
GPC3P51654 HMGN1P20-201ENST00000411849 300 ntBASIC6.78□□□□□ -1.32
GPC3P51654 AC116036.1-201ENST00000412199 367 ntBASIC6.78□□□□□ -1.32
GPC3P51654 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.78□□□□□ -1.32
GPC3P51654 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.78□□□□□ -1.32
GPC3P51654 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.78□□□□□ -1.32
GPC3P51654 IPPKP1-201ENST00000422501 768 ntBASIC6.78□□□□□ -1.32
GPC3P51654 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.78□□□□□ -1.32
GPC3P51654 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.78□□□□□ -1.32
GPC3P51654 FTLP8-201ENST00000446770 267 ntBASIC6.78□□□□□ -1.32
GPC3P51654 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
GPC3P51654 HLA-DPA3-207ENST00000454398 229 ntBASIC6.78□□□□□ -1.32
GPC3P51654 PPP1R11P1-201ENST00000486095 376 ntBASIC6.78□□□□□ -1.32
GPC3P51654 AC006499.4-201ENST00000510947 694 ntBASIC6.78□□□□□ -1.32
GPC3P51654 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.78□□□□□ -1.32
GPC3P51654 OR5H7P-201ENST00000514084 930 ntBASIC6.78□□□□□ -1.32
GPC3P51654 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
GPC3P51654 IGKV2-4-201ENST00000523070 340 ntBASIC6.78□□□□□ -1.32
GPC3P51654 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.78□□□□□ -1.32
GPC3P51654 OR7E158P-201ENST00000524483 910 ntBASIC6.78□□□□□ -1.32
GPC3P51654 RPA2P3-201ENST00000533268 770 ntBASIC6.78□□□□□ -1.32
GPC3P51654 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.78□□□□□ -1.32
GPC3P51654 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.78□□□□□ -1.32
GPC3P51654 RPA2P1-201ENST00000556557 721 ntBASIC6.78□□□□□ -1.32
GPC3P51654 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.78□□□□□ -1.32
GPC3P51654 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.78□□□□□ -1.32
GPC3P51654 AL021368.3-201ENST00000607119 578 ntBASIC6.78□□□□□ -1.32
GPC3P51654 AL137246.2-201ENST00000613439 662 ntBASIC6.78□□□□□ -1.32
GPC3P51654 AC245014.3-201ENST00000618589 347 ntBASIC6.78□□□□□ -1.32
GPC3P51654 AC129778.1-202ENST00000623812 261 ntBASIC6.78□□□□□ -1.32
GPC3P51654 SNX18P12-201ENST00000624821 759 ntBASIC6.78□□□□□ -1.32
GPC3P51654 AC129915.3-201ENST00000634128 948 ntBASIC6.78□□□□□ -1.32
GPC3P51654 AL591379.1-207ENST00000635982 261 ntBASIC6.78□□□□□ -1.32
GPC3P51654 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.78□□□□□ -1.32
GPC3P51654 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
GPC3P51654 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.78□□□□□ -1.32
GPC3P51654 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
GPC3P51654 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
GPC3P51654 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
GPC3P51654 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
GPC3P51654 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
GPC3P51654 TTC41P-205ENST00000551270 3963 ntBASIC6.77□□□□□ -1.32
GPC3P51654 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
GPC3P51654 AOX3P-204ENST00000491025 2107 ntBASIC6.77□□□□□ -1.33
GPC3P51654 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.77□□□□□ -1.33
GPC3P51654 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
GPC3P51654 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.77□□□□□ -1.33
GPC3P51654 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.77□□□□□ -1.33
GPC3P51654 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
GPC3P51654 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
GPC3P51654 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.77□□□□□ -1.33
GPC3P51654 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
GPC3P51654 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.77□□□□□ -1.33
GPC3P51654 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
GPC3P51654 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
GPC3P51654 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
GPC3P51654 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
GPC3P51654 RNFT1P3-201ENST00000340898 1052 ntBASIC6.77□□□□□ -1.33
GPC3P51654 OR7E25P-201ENST00000344844 931 ntBASIC6.77□□□□□ -1.33
GPC3P51654 RNA5SP273-201ENST00000362484 113 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms