RNA–Protein interactions for RNA: ENST00000278193.6

LIN7C-201, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7C, Length 4,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-201ENST00000278193 SLC24A1O60721 1099 aa12.83□□□□□ -0.36
LIN7C-201ENST00000278193 EHMT2Q96KQ7 1210 aa12.17□□□□□ -0.46
LIN7C-201ENST00000278193 CHIC1Q5VXU3 224 aa12.03□□□□□ -0.48
LIN7C-201ENST00000278193 MYT1Q01538 1121 aa11.75□□□□□ -0.53
LIN7C-201ENST00000278193 DAXXQ9UER7 740 aaPredicted RBP11.63□□□□□ -0.55
LIN7C-201ENST00000278193 TTBK1Q5TCY1 1321 aaPredicted RBP11.56□□□□□ -0.56
LIN7C-201ENST00000278193 PELP1Q8IZL8 1130 aaKnown RBP11.53□□□□□ -0.56
LIN7C-201ENST00000278193 RTN4Q9NQC3 1192 aaKnown RBP11.46□□□□□ -0.57
LIN7C-201ENST00000278193 PLPPR3Q6T4P5 718 aa11.44□□□□□ -0.58
LIN7C-201ENST00000278193 ERICH6Q7L0X2 663 aa11.43□□□□□ -0.58
LIN7C-201ENST00000278193 NCBP3Q53F19 620 aaKnown RBP11.38□□□□□ -0.59
LIN7C-201ENST00000278193 AMER1Q5JTC6 1135 aaPredicted RBP11.38□□□□□ -0.59
LIN7C-201ENST00000278193 RANGAP1P46060 587 aaPredicted RBP11.3□□□□□ -0.6
LIN7C-201ENST00000278193 PRKCSHP14314 528 aaPredicted RBP11.08□□□□□ -0.64
LIN7C-201ENST00000278193 ARXQ96QS3 562 aa11.01□□□□□ -0.65
LIN7C-201ENST00000278193 KCNA4P22459 653 aa10.98□□□□□ -0.65
LIN7C-201ENST00000278193 AEBP2Q6ZN18 517 aaPredicted RBP10.98□□□□□ -0.65
LIN7C-201ENST00000278193 CSRNP3Q8WYN3 585 aa10.89□□□□□ -0.67
LIN7C-201ENST00000278193 APLP2Q06481 763 aa10.88□□□□□ -0.67
LIN7C-201ENST00000278193 TULP1O00294 542 aaPredicted RBP10.85□□□□□ -0.67
LIN7C-201ENST00000278193 HOMEZQ8IX15 550 aa10.85□□□□□ -0.67
LIN7C-201ENST00000278193 BCANQ96GW7 911 aa10.77□□□□□ -0.68
LIN7C-201ENST00000278193 TIMELESSQ9UNS1 1208 aa10.77□□□□□ -0.69
LIN7C-201ENST00000278193 TAOK2Q9UL54 1235 aa10.72□□□□□ -0.69
LIN7C-201ENST00000278193 TPRNQ4KMQ1 711 aa10.72□□□□□ -0.69
LIN7C-201ENST00000278193 EIF5BO60841 1220 aaKnown RBP10.7□□□□□ -0.7
LIN7C-201ENST00000278193 PHF23Q9BUL5 403 aaPredicted RBP10.67□□□□□ -0.7
LIN7C-201ENST00000278193 PODXL2Q9NZ53 605 aa10.66□□□□□ -0.7
LIN7C-201ENST00000278193 SLC4A1APQ9BWU0 796 aaKnown RBP10.64□□□□□ -0.71
LIN7C-201ENST00000278193 HAP1P54257 671 aaPredicted RBP10.63□□□□□ -0.71
LIN7C-201ENST00000278193 NISCHQ9Y2I1 1504 aa10.52□□□□□ -0.73
LIN7C-201ENST00000278193 GTF3C3Q9Y5Q9 886 aa10.48□□□□□ -0.73
LIN7C-201ENST00000278193 NPM2Q86SE8 214 aaKnown RBP10.43□□□□□ -0.74
LIN7C-201ENST00000278193 C14orf37Q86TY3 774 aa10.42□□□□□ -0.74
LIN7C-201ENST00000278193 KLHL34Q8N239 644 aa10.41□□□□□ -0.74
LIN7C-201ENST00000278193 DCAF8L2P0C7V8 631 aa10.4□□□□□ -0.75
LIN7C-201ENST00000278193 PLCB2Q00722 1185 aa10.37□□□□□ -0.75
LIN7C-201ENST00000278193 FBXO3Q9UK99 471 aa10.19□□□□□ -0.78
LIN7C-201ENST00000278193 SUPT5HO00267 1087 aaKnown RBP10.17□□□□□ -0.78
LIN7C-201ENST00000278193 TMEM132AQ24JP5 1023 aa10.11□□□□□ -0.79
LIN7C-201ENST00000278193 FKBP8Q14318 412 aa10.1□□□□□ -0.79
LIN7C-201ENST00000278193 VSIG10Q8N0Z9 540 aa10.09□□□□□ -0.79
LIN7C-201ENST00000278193 CDK11BP21127 795 aaKnown RBP10.01□□□□□ -0.81
LIN7C-201ENST00000278193 CDK11AQ9UQ88 783 aaPredicted RBP10.01□□□□□ -0.81
LIN7C-201ENST00000278193 PLEKHG5O94827 1062 aa9.98□□□□□ -0.81
LIN7C-201ENST00000278193 TRIM26Q12899 539 aaPredicted RBP9.96□□□□□ -0.82
LIN7C-201ENST00000278193 NBR1Q14596 966 aa9.95□□□□□ -0.82
LIN7C-201ENST00000278193 HMGB1P09429 215 aaKnown RBP9.9□□□□□ -0.82
LIN7C-201ENST00000278193 POLR3GLQ9BT43 218 aa9.9□□□□□ -0.82
LIN7C-201ENST00000278193 BCL11AQ9H165 835 aa9.87□□□□□ -0.83
LIN7C-201ENST00000278193 ADRA2BP18089 450 aa9.84□□□□□ -0.83
LIN7C-201ENST00000278193 PDIA4P13667 645 aaKnown RBP9.83□□□□□ -0.84
LIN7C-201ENST00000278193 FAM9AQ8IZU1 332 aaPredicted RBP9.82□□□□□ -0.84
LIN7C-201ENST00000278193 UBTFP17480 764 aaKnown RBP9.82□□□□□ -0.84
LIN7C-201ENST00000278193 CFAP44Q96MT7 982 aa9.8□□□□□ -0.84
LIN7C-201ENST00000278193 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.8□□□□□ -0.84
LIN7C-201ENST00000278193 NEFLP07196 543 aa9.78□□□□□ -0.84
LIN7C-201ENST00000278193 FBLN2P98095 1184 aa9.76□□□□□ -0.85
LIN7C-201ENST00000278193 ARID3AQ99856 593 aa9.76□□□□□ -0.85
LIN7C-201ENST00000278193 CCDC9Q9Y3X0 531 aaKnown RBP9.76□□□□□ -0.85
LIN7C-201ENST00000278193 ZBTB22O15209 634 aa9.76□□□□□ -0.85
LIN7C-201ENST00000278193 KDM2AQ9Y2K7 1162 aa9.75□□□□□ -0.85
LIN7C-201ENST00000278193 SHROOM4Q9ULL8 1493 aa9.72□□□□□ -0.85
LIN7C-201ENST00000278193 PAXIP1Q6ZW49 1069 aaPredicted RBP9.71□□□□□ -0.85
LIN7C-201ENST00000278193 ZBTB7CA1YPR0 619 aa9.7□□□□□ -0.86
LIN7C-201ENST00000278193 CHMP4AQ9BY43 222 aa9.69□□□□□ -0.86
LIN7C-201ENST00000278193 HSP90B1P14625 803 aaKnown RBP9.69□□□□□ -0.86
LIN7C-201ENST00000278193 LOC105371045A0A1W2PR82 267 aa9.68□□□□□ -0.86
LIN7C-201ENST00000278193 PDE4CQ08493 712 aa9.67□□□□□ -0.86
LIN7C-201ENST00000278193 UBE2Q2Q8WVN8 375 aa9.64□□□□□ -0.87
LIN7C-201ENST00000278193 BRD2P25440 801 aaKnown RBP9.64□□□□□ -0.87
LIN7C-201ENST00000278193 HRCP23327 699 aa9.63□□□□□ -0.87
LIN7C-201ENST00000278193 NPM3O75607 178 aaKnown RBP9.6□□□□□ -0.87
LIN7C-201ENST00000278193 TAF7LQ5H9L4 462 aa9.56□□□□□ -0.88
LIN7C-201ENST00000278193 DHX37Q8IY37 1157 aaKnown RBP9.54□□□□□ -0.88
LIN7C-201ENST00000278193 CNKSR2Q8WXI2 1034 aa9.53□□□□□ -0.88
LIN7C-201ENST00000278193 FOXD4L1Q9NU39 408 aa9.52□□□□□ -0.89
LIN7C-201ENST00000278193 PPP4R3CPQ6ZMV5 832 aa9.48□□□□□ -0.89
LIN7C-201ENST00000278193 ZNF326Q5BKZ1 582 aaKnown RBP9.47□□□□□ -0.89
LIN7C-201ENST00000278193 TSHZ2Q9NRE2 1034 aa9.45□□□□□ -0.9
LIN7C-201ENST00000278193 SAMD1Q6SPF0 538 aaPredicted RBP9.45□□□□□ -0.9
LIN7C-201ENST00000278193 PKNOX2Q96KN3 472 aa9.44□□□□□ -0.9
LIN7C-201ENST00000278193 IGSF3O75054 1194 aa9.4□□□□□ -0.9
LIN7C-201ENST00000278193 MYT1LQ9UL68 1186 aa9.4□□□□□ -0.9
LIN7C-201ENST00000278193 SPRYD3Q8NCJ5 442 aa9.39□□□□□ -0.91
LIN7C-201ENST00000278193 ARID4BQ4LE39 1312 aaPredicted RBP9.38□□□□□ -0.91
LIN7C-201ENST00000278193 BBXQ8WY36 941 aaPredicted RBP9.38□□□□□ -0.91
LIN7C-201ENST00000278193 USP35Q9P2H5 1018 aa9.38□□□□□ -0.91
LIN7C-201ENST00000278193 RAD21O60216 631 aa9.35□□□□□ -0.91
LIN7C-201ENST00000278193 ZEB1P37275 1124 aaPredicted RBP9.34□□□□□ -0.91
LIN7C-201ENST00000278193 A0A0U1RQG5 324 aaPredicted RBP9.34□□□□□ -0.91
LIN7C-201ENST00000278193 PUS7Q96PZ0 661 aaKnown RBP9.33□□□□□ -0.92
LIN7C-201ENST00000278193 RSPH6AQ9H0K4 717 aa9.33□□□□□ -0.92
LIN7C-201ENST00000278193 ABCC9O60706 1549 aa9.33□□□□□ -0.92
LIN7C-201ENST00000278193 RBM25P49756 843 aaKnown RBP9.32□□□□□ -0.92
LIN7C-201ENST00000278193 KCTD17Q8N5Z5 321 aa9.32□□□□□ -0.92
LIN7C-201ENST00000278193 CENPBP07199 599 aaPredicted RBP9.32□□□□□ -0.92
LIN7C-201ENST00000278193 NEUROD2Q15784 382 aa9.3□□□□□ -0.92
LIN7C-201ENST00000278193 BCCIPQ9P287 314 aaKnown RBP eCLIP9.28□□□□□ -0.92
LIN7C-201ENST00000278193 PPM1GO15355 546 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms