RNA–Protein interactions for RNA: ENST00000378803.5

CDKL4-201, Transcript of cyclin dependent kinase like 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKL4, Length 1,567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL4-201ENST00000378803 AEBP2Q6ZN18 517 aaPredicted RBP27.94■■■□□ 2.06
CDKL4-201ENST00000378803 CHIC1Q5VXU3 224 aa27.11■■□□□ 1.93
CDKL4-201ENST00000378803 SENP3Q9H4L4 574 aaPredicted RBP23.86■■□□□ 1.41
CDKL4-201ENST00000378803 PHF23Q9BUL5 403 aaPredicted RBP23.76■■□□□ 1.39
CDKL4-201ENST00000378803 FOXD1Q16676 465 aa22.1■■□□□ 1.13
CDKL4-201ENST00000378803 PLPPR3Q6T4P5 718 aa21.93■■□□□ 1.1
CDKL4-201ENST00000378803 PPP6R1Q9UPN7 881 aa21.03■□□□□ 0.96
CDKL4-201ENST00000378803 ADRA2BP18089 450 aa21.02■□□□□ 0.95
CDKL4-201ENST00000378803 PIAS4Q8N2W9 510 aaPredicted RBP20.81■□□□□ 0.92
CDKL4-201ENST00000378803 MSH5O43196 834 aa20.57■□□□□ 0.88
CDKL4-201ENST00000378803 POTEDQ86YR6 584 aa20.17■□□□□ 0.82
CDKL4-201ENST00000378803 SCAF1Q9H7N4 1312 aaKnown RBP19.34■□□□□ 0.69
CDKL4-201ENST00000378803 PPP4R3CPQ6ZMV5 832 aa19.27■□□□□ 0.67
CDKL4-201ENST00000378803 MAPK8IP2Q13387 824 aaPredicted RBP19.12■□□□□ 0.65
CDKL4-201ENST00000378803 DMRT2Q9Y5R5 561 aa18.98■□□□□ 0.63
CDKL4-201ENST00000378803 CNKSR2Q8WXI2 1034 aa18.81■□□□□ 0.6
CDKL4-201ENST00000378803 NCBP3Q53F19 620 aaKnown RBP18.75■□□□□ 0.59
CDKL4-201ENST00000378803 RNF216Q9NWF9 866 aaPredicted RBP18.51■□□□□ 0.55
CDKL4-201ENST00000378803 KCNA4P22459 653 aa18.49■□□□□ 0.55
CDKL4-201ENST00000378803 HOXD11P31277 338 aaPredicted RBP18.49■□□□□ 0.55
CDKL4-201ENST00000378803 NPM3O75607 178 aaKnown RBP18.4■□□□□ 0.54
CDKL4-201ENST00000378803 DCAF8L1A6NGE4 600 aa18.15■□□□□ 0.5
CDKL4-201ENST00000378803 DNAJC5BQ9UF47 199 aa17.98■□□□□ 0.47
CDKL4-201ENST00000378803 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.62■□□□□ 0.41
CDKL4-201ENST00000378803 SLC4A1APQ9BWU0 796 aaKnown RBP17.6■□□□□ 0.41
CDKL4-201ENST00000378803 RNF39Q9H2S5 420 aa17.55■□□□□ 0.4
CDKL4-201ENST00000378803 SLC4A2P04920 1241 aa17.41■□□□□ 0.38
CDKL4-201ENST00000378803 C1QBPQ07021 282 aaKnown RBP17.37■□□□□ 0.37
CDKL4-201ENST00000378803 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
CDKL4-201ENST00000378803 U3KPZ7 1027 aaPredicted RBP17.28■□□□□ 0.36
CDKL4-201ENST00000378803 FOXD4L1Q9NU39 408 aa17.15■□□□□ 0.34
CDKL4-201ENST00000378803 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.06■□□□□ 0.32
CDKL4-201ENST00000378803 HNRNPUL2Q1KMD3 747 aaKnown RBP17.06■□□□□ 0.32
CDKL4-201ENST00000378803 MYCNP04198 464 aaPredicted RBP17.05■□□□□ 0.32
CDKL4-201ENST00000378803 ZBTB22O15209 634 aa16.98■□□□□ 0.31
CDKL4-201ENST00000378803 APLP2Q06481 763 aa16.98■□□□□ 0.31
CDKL4-201ENST00000378803 SAMD1Q6SPF0 538 aaPredicted RBP16.97■□□□□ 0.31
CDKL4-201ENST00000378803 SPINK5Q9NQ38 1064 aaPredicted RBP16.84■□□□□ 0.29
CDKL4-201ENST00000378803 CAPN15O75808 1086 aa16.83■□□□□ 0.28
CDKL4-201ENST00000378803 EHMT2Q96KQ7 1210 aa16.75■□□□□ 0.27
CDKL4-201ENST00000378803 ZNF219Q9P2Y4 722 aaPredicted RBP16.72■□□□□ 0.27
CDKL4-201ENST00000378803 CSRNP3Q8WYN3 585 aa16.69■□□□□ 0.26
CDKL4-201ENST00000378803 TRHP20396 242 aaPredicted RBP16.68■□□□□ 0.26
CDKL4-201ENST00000378803 ATXN8OSP0DMR3 200 aa16.61■□□□□ 0.25
CDKL4-201ENST00000378803 DSG3P32926 999 aa16.6■□□□□ 0.25
CDKL4-201ENST00000378803 ATF5Q9Y2D1 282 aaPredicted RBP16.52■□□□□ 0.24
CDKL4-201ENST00000378803 ABCB7O75027 752 aa16.46■□□□□ 0.23
CDKL4-201ENST00000378803 POLA2Q14181 598 aa16.36■□□□□ 0.21
CDKL4-201ENST00000378803 ZBTB12Q9Y330 459 aaPredicted RBP16.16■□□□□ 0.18
CDKL4-201ENST00000378803 FBLN2P98095 1184 aa15.96■□□□□ 0.14
CDKL4-201ENST00000378803 RBM42Q9BTD8 480 aaKnown RBP15.9■□□□□ 0.14
CDKL4-201ENST00000378803 MKRN4PQ13434 485 aaPredicted RBP15.81■□□□□ 0.12
CDKL4-201ENST00000378803 OSCARQ8IYS5 282 aa15.79■□□□□ 0.12
CDKL4-201ENST00000378803 SPDYE2BA6NHP3 402 aa15.66■□□□□ 0.1
CDKL4-201ENST00000378803 SPDYE6P0CI01 402 aa15.66■□□□□ 0.1
CDKL4-201ENST00000378803 SPDYE2Q495Y8 402 aa15.66■□□□□ 0.1
CDKL4-201ENST00000378803 AKT1S1Q96B36 256 aa15.62■□□□□ 0.09
CDKL4-201ENST00000378803 POTEHQ6S545 545 aa15.57■□□□□ 0.08
CDKL4-201ENST00000378803 ZNF692Q9BU19 519 aaPredicted RBP15.53■□□□□ 0.08
CDKL4-201ENST00000378803 SSUH2Q9Y2M2 353 aa15.49■□□□□ 0.07
CDKL4-201ENST00000378803 REM2Q8IYK8 340 aaPredicted RBP15.44■□□□□ 0.06
CDKL4-201ENST00000378803 SPDYE4A6NLX3 237 aa15.38■□□□□ 0.05
CDKL4-201ENST00000378803 PABPN1Q86U42 306 aaKnown RBP eCLIP15.31■□□□□ 0.04
CDKL4-201ENST00000378803 CHRDL2Q6WN34 429 aa15.29■□□□□ 0.04
CDKL4-201ENST00000378803 PITPNM1O00562 1244 aa15.26■□□□□ 0.03
CDKL4-201ENST00000378803 SPDYE1Q8NFV5 336 aaPredicted RBP15.26■□□□□ 0.03
CDKL4-201ENST00000378803 CLEC11AQ9Y240 323 aa15.15■□□□□ 0.02
CDKL4-201ENST00000378803 FKBP8Q14318 412 aa15.12■□□□□ 0.01
CDKL4-201ENST00000378803 PROM2Q8N271 834 aa15.09■□□□□ 0.01
CDKL4-201ENST00000378803 STAG3Q9UJ98 1225 aa15.07■□□□□ 0
CDKL4-201ENST00000378803 FXR2P51116 673 aaKnown RBP eCLIP15.04■□□□□ -0
CDKL4-201ENST00000378803 PIP4P2Q8N4L2 257 aa15.02■□□□□ -0
CDKL4-201ENST00000378803 PRR29P0C7W0 189 aa15.01□□□□□ -0.01
CDKL4-201ENST00000378803 PRKAR2AP13861 404 aaKnown RBP14.88□□□□□ -0.03
CDKL4-201ENST00000378803 CHADLQ6NUI6 762 aa14.77□□□□□ -0.04
CDKL4-201ENST00000378803 FBXO3Q9UK99 471 aa14.74□□□□□ -0.05
CDKL4-201ENST00000378803 CREBZFQ9NS37 354 aa14.73□□□□□ -0.05
CDKL4-201ENST00000378803 FARP1Q9Y4F1 1045 aaPredicted RBP14.67□□□□□ -0.06
CDKL4-201ENST00000378803 PLEKHG5O94827 1062 aa14.64□□□□□ -0.07
CDKL4-201ENST00000378803 HAX1O00165 279 aa14.62□□□□□ -0.07
CDKL4-201ENST00000378803 MIER1Q8N108 512 aa14.62□□□□□ -0.07
CDKL4-201ENST00000378803 PLCD3Q8N3E9 789 aa14.57□□□□□ -0.08
CDKL4-201ENST00000378803 NPM1P06748 294 aaKnown RBP eCLIP14.55□□□□□ -0.08
CDKL4-201ENST00000378803 C19orf67A6NJJ6 358 aa14.54□□□□□ -0.08
CDKL4-201ENST00000378803 MNX1P50219 401 aaPredicted RBP14.54□□□□□ -0.08
CDKL4-201ENST00000378803 VASPP50552 380 aaPredicted RBP14.49□□□□□ -0.09
CDKL4-201ENST00000378803 ZBTB47Q9UFB7 747 aaPredicted RBP14.49□□□□□ -0.09
CDKL4-201ENST00000378803 CD44P16070 742 aaKnown RBP14.44□□□□□ -0.1
CDKL4-201ENST00000378803 EVX2Q03828 476 aa14.41□□□□□ -0.1
CDKL4-201ENST00000378803 SP7Q8TDD2 431 aaPredicted RBP14.41□□□□□ -0.1
CDKL4-201ENST00000378803 PAK3O75914 559 aaPredicted RBP14.38□□□□□ -0.11
CDKL4-201ENST00000378803 ZRANB1Q9UGI0 708 aa14.32□□□□□ -0.12
CDKL4-201ENST00000378803 KLHL34Q8N239 644 aa14.31□□□□□ -0.12
CDKL4-201ENST00000378803 ZNF579Q8NAF0 562 aaKnown RBP14.26□□□□□ -0.13
CDKL4-201ENST00000378803 NUBP1P53384 320 aa14.26□□□□□ -0.13
CDKL4-201ENST00000378803 CLCN6P51797 869 aa14.25□□□□□ -0.13
CDKL4-201ENST00000378803 IFNLR1Q8IU57 520 aaPredicted RBP14.24□□□□□ -0.13
CDKL4-201ENST00000378803 RASEFQ8IZ41 740 aa14.24□□□□□ -0.13
CDKL4-201ENST00000378803 TSPYL2Q9H2G4 693 aaPredicted RBP14.23□□□□□ -0.13
CDKL4-201ENST00000378803 FAM212AQ96EL1 285 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms