RNA–Protein interactions for RNA: ENST00000550359.6

PPFIA2-219, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 2 BASIC

Gene PPFIA2, Length 3,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-219ENST00000550359 NISCHQ9Y2I1 1504 aa11.79□□□□□ -0.52
PPFIA2-219ENST00000550359 HRCP23327 699 aa11.28□□□□□ -0.6
PPFIA2-219ENST00000550359 PPARGC1BQ86YN6 1023 aaKnown RBP11.23□□□□□ -0.61
PPFIA2-219ENST00000550359 PCGF6Q9BYE7 350 aa11.11□□□□□ -0.63
PPFIA2-219ENST00000550359 PELP1Q8IZL8 1130 aaKnown RBP11□□□□□ -0.65
PPFIA2-219ENST00000550359 SUPT5HO00267 1087 aaKnown RBP10.99□□□□□ -0.65
PPFIA2-219ENST00000550359 SHROOM4Q9ULL8 1493 aa10.96□□□□□ -0.65
PPFIA2-219ENST00000550359 SCAF1Q9H7N4 1312 aaKnown RBP10.83□□□□□ -0.68
PPFIA2-219ENST00000550359 MYO15BQ96JP2 1530 aa10.82□□□□□ -0.68
PPFIA2-219ENST00000550359 CHIC1Q5VXU3 224 aa10.73□□□□□ -0.69
PPFIA2-219ENST00000550359 LOC105371045A0A1W2PR82 267 aa10.64□□□□□ -0.71
PPFIA2-219ENST00000550359 MYT1Q01538 1121 aa10.56□□□□□ -0.72
PPFIA2-219ENST00000550359 TRIM26Q12899 539 aaPredicted RBP10.55□□□□□ -0.72
PPFIA2-219ENST00000550359 NEUROD1Q13562 356 aa10.49□□□□□ -0.73
PPFIA2-219ENST00000550359 GTF3C3Q9Y5Q9 886 aa10.47□□□□□ -0.73
PPFIA2-219ENST00000550359 ACIN1Q9UKV3 1341 aaKnown RBP10.46□□□□□ -0.73
PPFIA2-219ENST00000550359 DCAF1Q9Y4B6 1507 aa10.46□□□□□ -0.73
PPFIA2-219ENST00000550359 ZEB1P37275 1124 aaPredicted RBP10.45□□□□□ -0.74
PPFIA2-219ENST00000550359 CCDC180Q9P1Z9 1646 aa10.34□□□□□ -0.75
PPFIA2-219ENST00000550359 EHMT2Q96KQ7 1210 aa10.33□□□□□ -0.76
PPFIA2-219ENST00000550359 CENPBP07199 599 aaPredicted RBP10.29□□□□□ -0.76
PPFIA2-219ENST00000550359 DCAF8L2P0C7V8 631 aa10.26□□□□□ -0.77
PPFIA2-219ENST00000550359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.24□□□□□ -0.77
PPFIA2-219ENST00000550359 YTHDC1Q96MU7 727 aaKnown RBP10.24□□□□□ -0.77
PPFIA2-219ENST00000550359 DIEXFQ68CQ4 756 aaKnown RBP10.23□□□□□ -0.77
PPFIA2-219ENST00000550359 FAM9AQ8IZU1 332 aaPredicted RBP10.23□□□□□ -0.77
PPFIA2-219ENST00000550359 CCER1Q8TC90 406 aaPredicted RBP10.19□□□□□ -0.78
PPFIA2-219ENST00000550359 BCL11AQ9H165 835 aa10.08□□□□□ -0.8
PPFIA2-219ENST00000550359 TTBK1Q5TCY1 1321 aaPredicted RBP10.08□□□□□ -0.8
PPFIA2-219ENST00000550359 TRIM41Q8WV44 630 aa10.04□□□□□ -0.8
PPFIA2-219ENST00000550359 ZCCHC6Q5VYS8 1495 aaKnown RBP10.03□□□□□ -0.8
PPFIA2-219ENST00000550359 ABCC9O60706 1549 aa10□□□□□ -0.81
PPFIA2-219ENST00000550359 MIER1Q8N108 512 aa9.99□□□□□ -0.81
PPFIA2-219ENST00000550359 ZNF316A6NFI3 1004 aaPredicted RBP9.95□□□□□ -0.82
PPFIA2-219ENST00000550359 ANP32EQ9BTT0 268 aa9.94□□□□□ -0.82
PPFIA2-219ENST00000550359 CSRNP3Q8WYN3 585 aa9.92□□□□□ -0.82
PPFIA2-219ENST00000550359 DNAJC5BQ9UF47 199 aa9.9□□□□□ -0.82
PPFIA2-219ENST00000550359 TSHZ2Q9NRE2 1034 aa9.87□□□□□ -0.83
PPFIA2-219ENST00000550359 SUPT16HQ9Y5B9 1047 aaKnown RBP9.86□□□□□ -0.83
PPFIA2-219ENST00000550359 BCANQ96GW7 911 aa9.8□□□□□ -0.84
PPFIA2-219ENST00000550359 PRKCSHP14314 528 aaPredicted RBP9.77□□□□□ -0.85
PPFIA2-219ENST00000550359 HNRNPUL2Q1KMD3 747 aaKnown RBP9.74□□□□□ -0.85
PPFIA2-219ENST00000550359 DNAJC5Q9H3Z4 198 aa9.66□□□□□ -0.86
PPFIA2-219ENST00000550359 RSF1Q96T23 1441 aaPredicted RBP9.64□□□□□ -0.87
PPFIA2-219ENST00000550359 FKBP8Q14318 412 aa9.63□□□□□ -0.87
PPFIA2-219ENST00000550359 RB1CC1Q8TDY2 1594 aa9.63□□□□□ -0.87
PPFIA2-219ENST00000550359 KCNH8Q96L42 1107 aa9.63□□□□□ -0.87
PPFIA2-219ENST00000550359 RBM19Q9Y4C8 960 aaKnown RBP9.63□□□□□ -0.87
PPFIA2-219ENST00000550359 ITGAEP38570 1179 aa9.63□□□□□ -0.87
PPFIA2-219ENST00000550359 CLSPNQ9HAW4 1339 aa9.61□□□□□ -0.87
PPFIA2-219ENST00000550359 MSH5O43196 834 aa9.58□□□□□ -0.88
PPFIA2-219ENST00000550359 UBTFP17480 764 aaKnown RBP9.56□□□□□ -0.88
PPFIA2-219ENST00000550359 CEP162Q5TB80 1403 aa9.54□□□□□ -0.88
PPFIA2-219ENST00000550359 ERICH6Q7L0X2 663 aa9.53□□□□□ -0.88
PPFIA2-219ENST00000550359 ANO8Q9HCE9 1232 aaPredicted RBP9.52□□□□□ -0.89
PPFIA2-219ENST00000550359 RANGAP1P46060 587 aaPredicted RBP9.5□□□□□ -0.89
PPFIA2-219ENST00000550359 WRNQ14191 1432 aaPredicted RBP eCLIP9.5□□□□□ -0.89
PPFIA2-219ENST00000550359 NEFLP07196 543 aa9.49□□□□□ -0.89
PPFIA2-219ENST00000550359 TRIM52Q96A61 297 aa9.46□□□□□ -0.89
PPFIA2-219ENST00000550359 DEKP35659 375 aaKnown RBP9.45□□□□□ -0.9
PPFIA2-219ENST00000550359 IRX6P78412 446 aaPredicted RBP9.44□□□□□ -0.9
PPFIA2-219ENST00000550359 UNC13AQ9UPW8 1703 aa9.44□□□□□ -0.9
PPFIA2-219ENST00000550359 CCDC136Q96JN2 1154 aa9.42□□□□□ -0.9
PPFIA2-219ENST00000550359 SCRIBQ14160 1630 aa9.42□□□□□ -0.9
PPFIA2-219ENST00000550359 SOGA1O94964 1423 aa9.41□□□□□ -0.9
PPFIA2-219ENST00000550359 NACADO15069 1562 aa9.41□□□□□ -0.9
PPFIA2-219ENST00000550359 DDX10Q13206 875 aaKnown RBP9.41□□□□□ -0.9
PPFIA2-219ENST00000550359 NBR1Q14596 966 aa9.4□□□□□ -0.9
PPFIA2-219ENST00000550359 TNIKQ9UKE5 1360 aa9.4□□□□□ -0.9
PPFIA2-219ENST00000550359 APLP2Q06481 763 aa9.4□□□□□ -0.91
PPFIA2-219ENST00000550359 SALL2Q9Y467 1007 aaPredicted RBP9.4□□□□□ -0.91
PPFIA2-219ENST00000550359 CCDC88BA6NC98 1476 aa9.4□□□□□ -0.91
PPFIA2-219ENST00000550359 ABCC8Q09428 1581 aa9.39□□□□□ -0.91
PPFIA2-219ENST00000550359 HIRIP3Q9BW71 556 aaPredicted RBP9.37□□□□□ -0.91
PPFIA2-219ENST00000550359 CECR2Q9BXF3 1484 aa9.37□□□□□ -0.91
PPFIA2-219ENST00000550359 RUSC2Q8N2Y8 1516 aa9.36□□□□□ -0.91
PPFIA2-219ENST00000550359 RTN4Q9NQC3 1192 aaKnown RBP9.36□□□□□ -0.91
PPFIA2-219ENST00000550359 CDK11AQ9UQ88 783 aaPredicted RBP9.36□□□□□ -0.91
PPFIA2-219ENST00000550359 DHX57Q6P158 1386 aaKnown RBP9.36□□□□□ -0.91
PPFIA2-219ENST00000550359 FANCIQ9NVI1 1328 aa9.34□□□□□ -0.91
PPFIA2-219ENST00000550359 BICRAQ9NZM4 1560 aa9.34□□□□□ -0.91
PPFIA2-219ENST00000550359 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.33□□□□□ -0.92
PPFIA2-219ENST00000550359 MROH2BQ7Z745 1585 aa9.31□□□□□ -0.92
PPFIA2-219ENST00000550359 IL27Q8NEV9 243 aa9.29□□□□□ -0.92
PPFIA2-219ENST00000550359 WIZO95785 1651 aa9.28□□□□□ -0.92
PPFIA2-219ENST00000550359 PAK3O75914 559 aaPredicted RBP9.28□□□□□ -0.92
PPFIA2-219ENST00000550359 CLIP1P30622 1438 aa9.26□□□□□ -0.93
PPFIA2-219ENST00000550359 MYT1LQ9UL68 1186 aa9.26□□□□□ -0.93
PPFIA2-219ENST00000550359 ANP32CO43423 234 aa9.25□□□□□ -0.93
PPFIA2-219ENST00000550359 GOLGA3Q08378 1498 aa9.25□□□□□ -0.93
PPFIA2-219ENST00000550359 HNRNPUQ00839 825 aaKnown RBP eCLIP9.24□□□□□ -0.93
PPFIA2-219ENST00000550359 B4GALNT3Q6L9W6 998 aa9.24□□□□□ -0.93
PPFIA2-219ENST00000550359 NOP58Q9Y2X3 529 aaKnown RBP9.24□□□□□ -0.93
PPFIA2-219ENST00000550359 SIN3AQ96ST3 1273 aa9.23□□□□□ -0.93
PPFIA2-219ENST00000550359 KANK4Q5T7N3 995 aaPredicted RBP9.23□□□□□ -0.93
PPFIA2-219ENST00000550359 CC2D2AQ9P2K1 1620 aa9.22□□□□□ -0.93
PPFIA2-219ENST00000550359 PPP1R15AO75807 674 aaPredicted RBP9.21□□□□□ -0.94
PPFIA2-219ENST00000550359 VPS8Q8N3P4 1428 aa9.21□□□□□ -0.94
PPFIA2-219ENST00000550359 RTL5Q5HYW3 569 aaPredicted RBP9.2□□□□□ -0.94
PPFIA2-219ENST00000550359 CUX2O14529 1486 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 291.6 ms