RNA–Protein interactions for RNA: ENST00000556557.1

RPA2P1-201, Transcript of replication protein A2 pseudogene 1, humanhuman

BASIC

Gene RPA2P1, Length 721 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2P1-201ENST00000556557 AEBP2Q6ZN18 517 aaPredicted RBP17.53■□□□□ 0.4
RPA2P1-201ENST00000556557 CHIC1Q5VXU3 224 aa16.86■□□□□ 0.29
RPA2P1-201ENST00000556557 SENP3Q9H4L4 574 aaPredicted RBP15.04■□□□□ -0
RPA2P1-201ENST00000556557 NISCHQ9Y2I1 1504 aa14.85□□□□□ -0.03
RPA2P1-201ENST00000556557 PHF23Q9BUL5 403 aaPredicted RBP14.81□□□□□ -0.04
RPA2P1-201ENST00000556557 FOXD1Q16676 465 aa13.92□□□□□ -0.18
RPA2P1-201ENST00000556557 PLPPR3Q6T4P5 718 aa13.58□□□□□ -0.24
RPA2P1-201ENST00000556557 CCDC180Q9P1Z9 1646 aa13.28□□□□□ -0.28
RPA2P1-201ENST00000556557 PPP6R1Q9UPN7 881 aa13.1□□□□□ -0.31
RPA2P1-201ENST00000556557 ADRA2BP18089 450 aa13.08□□□□□ -0.32
RPA2P1-201ENST00000556557 PIAS4Q8N2W9 510 aaPredicted RBP13.08□□□□□ -0.32
RPA2P1-201ENST00000556557 MSH5O43196 834 aa13.06□□□□□ -0.32
RPA2P1-201ENST00000556557 ABCC9O60706 1549 aa13.04□□□□□ -0.32
RPA2P1-201ENST00000556557 POTEDQ86YR6 584 aa12.67□□□□□ -0.38
RPA2P1-201ENST00000556557 RB1CC1Q8TDY2 1594 aa12.56□□□□□ -0.4
RPA2P1-201ENST00000556557 NACADO15069 1562 aa12.53□□□□□ -0.4
RPA2P1-201ENST00000556557 MYO15BQ96JP2 1530 aa12.45□□□□□ -0.42
RPA2P1-201ENST00000556557 DCAF8L2P0C7V8 631 aa12.43□□□□□ -0.42
RPA2P1-201ENST00000556557 ZCCHC6Q5VYS8 1495 aaKnown RBP12.34□□□□□ -0.43
RPA2P1-201ENST00000556557 DCAF1Q9Y4B6 1507 aa12.33□□□□□ -0.44
RPA2P1-201ENST00000556557 UNC13AQ9UPW8 1703 aa12.21□□□□□ -0.45
RPA2P1-201ENST00000556557 PABPN1Q86U42 306 aaKnown RBP eCLIP12.16□□□□□ -0.46
RPA2P1-201ENST00000556557 BICRAQ9NZM4 1560 aa12.13□□□□□ -0.47
RPA2P1-201ENST00000556557 SHROOM4Q9ULL8 1493 aa12.11□□□□□ -0.47
RPA2P1-201ENST00000556557 SCAF1Q9H7N4 1312 aaKnown RBP12.1□□□□□ -0.47
RPA2P1-201ENST00000556557 DNAJC5BQ9UF47 199 aa12.06□□□□□ -0.48
RPA2P1-201ENST00000556557 SCRIBQ14160 1630 aa12.03□□□□□ -0.48
RPA2P1-201ENST00000556557 MAPK8IP2Q13387 824 aaPredicted RBP11.94□□□□□ -0.5
RPA2P1-201ENST00000556557 DMRT2Q9Y5R5 561 aa11.92□□□□□ -0.5
RPA2P1-201ENST00000556557 PPP4R3CPQ6ZMV5 832 aa11.88□□□□□ -0.51
RPA2P1-201ENST00000556557 EIF4G1Q04637 1599 aaKnown RBP11.84□□□□□ -0.51
RPA2P1-201ENST00000556557 CC2D2AQ9P2K1 1620 aa11.81□□□□□ -0.52
RPA2P1-201ENST00000556557 CECR2Q9BXF3 1484 aa11.76□□□□□ -0.53
RPA2P1-201ENST00000556557 CNKSR2Q8WXI2 1034 aa11.67□□□□□ -0.54
RPA2P1-201ENST00000556557 NCAPD3P42695 1498 aa11.56□□□□□ -0.56
RPA2P1-201ENST00000556557 HOXD11P31277 338 aaPredicted RBP11.55□□□□□ -0.56
RPA2P1-201ENST00000556557 NCBP3Q53F19 620 aaKnown RBP11.55□□□□□ -0.56
RPA2P1-201ENST00000556557 BAZ1AQ9NRL2 1556 aaPredicted RBP11.54□□□□□ -0.56
RPA2P1-201ENST00000556557 SMARCA4P51532 1647 aa11.53□□□□□ -0.56
RPA2P1-201ENST00000556557 SMARCA2P51531 1590 aa11.53□□□□□ -0.56
RPA2P1-201ENST00000556557 RNF216Q9NWF9 866 aaPredicted RBP11.52□□□□□ -0.57
RPA2P1-201ENST00000556557 ATAD2BQ9ULI0 1458 aa11.51□□□□□ -0.57
RPA2P1-201ENST00000556557 HMGXB3Q12766 1538 aa11.49□□□□□ -0.57
RPA2P1-201ENST00000556557 PEG3Q9GZU2 1588 aa11.46□□□□□ -0.57
RPA2P1-201ENST00000556557 BAZ1BQ9UIG0 1483 aaKnown RBP11.42□□□□□ -0.58
RPA2P1-201ENST00000556557 DCAF8L1A6NGE4 600 aa11.41□□□□□ -0.58
RPA2P1-201ENST00000556557 MROH2BQ7Z745 1585 aa11.41□□□□□ -0.58
RPA2P1-201ENST00000556557 ERCC6Q03468 1493 aa11.3□□□□□ -0.6
RPA2P1-201ENST00000556557 NPM3O75607 178 aaKnown RBP11.29□□□□□ -0.6
RPA2P1-201ENST00000556557 LAMC3Q9Y6N6 1575 aa11.28□□□□□ -0.6
RPA2P1-201ENST00000556557 WIZO95785 1651 aa11.27□□□□□ -0.61
RPA2P1-201ENST00000556557 RSF1Q96T23 1441 aaPredicted RBP11.26□□□□□ -0.61
RPA2P1-201ENST00000556557 CUX2O14529 1486 aa11.25□□□□□ -0.61
RPA2P1-201ENST00000556557 NESP48681 1621 aa11.24□□□□□ -0.61
RPA2P1-201ENST00000556557 PDS5BQ9NTI5 1447 aa11.21□□□□□ -0.61
RPA2P1-201ENST00000556557 CADPSQ9ULU8 1353 aa11.21□□□□□ -0.61
RPA2P1-201ENST00000556557 KCNA4P22459 653 aa11.19□□□□□ -0.62
RPA2P1-201ENST00000556557 TOP2AP11388 1531 aaKnown RBP11.18□□□□□ -0.62
RPA2P1-201ENST00000556557 CFTRP13569 1480 aa11.12□□□□□ -0.63
RPA2P1-201ENST00000556557 THOC2Q8NI27 1593 aaKnown RBP11.11□□□□□ -0.63
RPA2P1-201ENST00000556557 RNF39Q9H2S5 420 aa11.11□□□□□ -0.63
RPA2P1-201ENST00000556557 KIF21AQ7Z4S6 1674 aa11.11□□□□□ -0.63
RPA2P1-201ENST00000556557 CACNB1Q02641 598 aaPredicted RBP11.08□□□□□ -0.64
RPA2P1-201ENST00000556557 MRC2Q9UBG0 1479 aa11.07□□□□□ -0.64
RPA2P1-201ENST00000556557 CEP164Q9UPV0 1460 aa11.06□□□□□ -0.64
RPA2P1-201ENST00000556557 FANCD2Q9BXW9 1451 aa11.06□□□□□ -0.64
RPA2P1-201ENST00000556557 DNAJC5Q9H3Z4 198 aa11.05□□□□□ -0.64
RPA2P1-201ENST00000556557 WDR62O43379 1518 aa11.04□□□□□ -0.64
RPA2P1-201ENST00000556557 CCDC88BA6NC98 1476 aa11.02□□□□□ -0.65
RPA2P1-201ENST00000556557 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.01□□□□□ -0.65
RPA2P1-201ENST00000556557 C1QBPQ07021 282 aaKnown RBP11□□□□□ -0.65
RPA2P1-201ENST00000556557 PRDM2Q13029 1718 aa11□□□□□ -0.65
RPA2P1-201ENST00000556557 ABCC8Q09428 1581 aa10.93□□□□□ -0.66
RPA2P1-201ENST00000556557 URB2Q14146 1524 aaKnown RBP10.93□□□□□ -0.66
RPA2P1-201ENST00000556557 TOPBP1Q92547 1522 aa10.86□□□□□ -0.67
RPA2P1-201ENST00000556557 SUPT5HO00267 1087 aaKnown RBP10.85□□□□□ -0.67
RPA2P1-201ENST00000556557 IFT140Q96RY7 1462 aa10.85□□□□□ -0.67
RPA2P1-201ENST00000556557 DNMBPQ6XZF7 1577 aa10.85□□□□□ -0.67
RPA2P1-201ENST00000556557 OSCARQ8IYS5 282 aa10.78□□□□□ -0.68
RPA2P1-201ENST00000556557 U3KPZ7 1027 aaPredicted RBP10.76□□□□□ -0.69
RPA2P1-201ENST00000556557 POLA1P09884 1462 aaPredicted RBP10.75□□□□□ -0.69
RPA2P1-201ENST00000556557 ZNF608Q9ULD9 1512 aaPredicted RBP10.74□□□□□ -0.69
RPA2P1-201ENST00000556557 TARBP1Q13395 1621 aaKnown RBP10.74□□□□□ -0.69
RPA2P1-201ENST00000556557 SOGA1O94964 1423 aa10.73□□□□□ -0.69
RPA2P1-201ENST00000556557 WDR97A6NE52 1622 aa10.73□□□□□ -0.69
RPA2P1-201ENST00000556557 SLC4A2P04920 1241 aa10.72□□□□□ -0.69
RPA2P1-201ENST00000556557 EIF4G3O43432 1585 aaKnown RBP10.72□□□□□ -0.69
RPA2P1-201ENST00000556557 FGD5Q6ZNL6 1462 aa10.71□□□□□ -0.69
RPA2P1-201ENST00000556557 CUX1P39880 1505 aa10.7□□□□□ -0.7
RPA2P1-201ENST00000556557 AQRO60306 1485 aaKnown RBP eCLIP10.68□□□□□ -0.7
RPA2P1-201ENST00000556557 RAD54L2Q9Y4B4 1467 aa10.68□□□□□ -0.7
RPA2P1-201ENST00000556557 TDRD9Q8NDG6 1382 aaKnown RBP10.65□□□□□ -0.7
RPA2P1-201ENST00000556557 SLC4A1APQ9BWU0 796 aaKnown RBP10.64□□□□□ -0.71
RPA2P1-201ENST00000556557 WRNQ14191 1432 aaPredicted RBP eCLIP10.64□□□□□ -0.71
RPA2P1-201ENST00000556557 GRIN2BQ13224 1484 aa10.63□□□□□ -0.71
RPA2P1-201ENST00000556557 ABCA10Q8WWZ4 1543 aa10.63□□□□□ -0.71
RPA2P1-201ENST00000556557 MAGI1Q96QZ7 1491 aaPredicted RBP10.62□□□□□ -0.71
RPA2P1-201ENST00000556557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.62□□□□□ -0.71
RPA2P1-201ENST00000556557 APLP2Q06481 763 aa10.62□□□□□ -0.71
RPA2P1-201ENST00000556557 HNRNPUL2Q1KMD3 747 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms