RNA–Protein interactions for RNA: ENST00000624821.1

SNX18P12-201, Transcript of sorting nexin 18 pseudogene 12, humanhuman

BASIC

Gene SNX18P12, Length 759 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18P12-201ENST00000624821 AEBP2Q6ZN18 517 aaPredicted RBP21.14■□□□□ 0.97
SNX18P12-201ENST00000624821 CHIC1Q5VXU3 224 aa19.79■□□□□ 0.76
SNX18P12-201ENST00000624821 SENP3Q9H4L4 574 aaPredicted RBP18.15■□□□□ 0.5
SNX18P12-201ENST00000624821 PHF23Q9BUL5 403 aaPredicted RBP17.84■□□□□ 0.45
SNX18P12-201ENST00000624821 FOXD1Q16676 465 aa16.98■□□□□ 0.31
SNX18P12-201ENST00000624821 POTEDQ86YR6 584 aa16.76■□□□□ 0.27
SNX18P12-201ENST00000624821 MSH5O43196 834 aa16.14■□□□□ 0.17
SNX18P12-201ENST00000624821 PIAS4Q8N2W9 510 aaPredicted RBP15.75■□□□□ 0.11
SNX18P12-201ENST00000624821 NISCHQ9Y2I1 1504 aa15.59■□□□□ 0.09
SNX18P12-201ENST00000624821 PPP6R1Q9UPN7 881 aa15.41■□□□□ 0.06
SNX18P12-201ENST00000624821 ADRA2BP18089 450 aa15.35■□□□□ 0.05
SNX18P12-201ENST00000624821 PLPPR3Q6T4P5 718 aa15.33■□□□□ 0.04
SNX18P12-201ENST00000624821 ABCC9O60706 1549 aa14.56□□□□□ -0.08
SNX18P12-201ENST00000624821 MAPK8IP2Q13387 824 aaPredicted RBP14.28□□□□□ -0.12
SNX18P12-201ENST00000624821 DMRT2Q9Y5R5 561 aa14.28□□□□□ -0.12
SNX18P12-201ENST00000624821 CACNB1Q02641 598 aaPredicted RBP14.25□□□□□ -0.13
SNX18P12-201ENST00000624821 CCDC180Q9P1Z9 1646 aa14.19□□□□□ -0.14
SNX18P12-201ENST00000624821 SCAF1Q9H7N4 1312 aaKnown RBP14.07□□□□□ -0.16
SNX18P12-201ENST00000624821 DNAJC5BQ9UF47 199 aa13.97□□□□□ -0.17
SNX18P12-201ENST00000624821 DCAF8L1A6NGE4 600 aa13.81□□□□□ -0.2
SNX18P12-201ENST00000624821 RNF39Q9H2S5 420 aa13.69□□□□□ -0.22
SNX18P12-201ENST00000624821 RB1CC1Q8TDY2 1594 aa13.65□□□□□ -0.22
SNX18P12-201ENST00000624821 UNC13AQ9UPW8 1703 aa13.52□□□□□ -0.25
SNX18P12-201ENST00000624821 HOXD11P31277 338 aaPredicted RBP13.51□□□□□ -0.25
SNX18P12-201ENST00000624821 PABPN1Q86U42 306 aaKnown RBP eCLIP13.48□□□□□ -0.25
SNX18P12-201ENST00000624821 C1QBPQ07021 282 aaKnown RBP13.47□□□□□ -0.25
SNX18P12-201ENST00000624821 NACADO15069 1562 aa13.44□□□□□ -0.26
SNX18P12-201ENST00000624821 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
SNX18P12-201ENST00000624821 BICRAQ9NZM4 1560 aa13.32□□□□□ -0.28
SNX18P12-201ENST00000624821 DCAF8L2P0C7V8 631 aa13.32□□□□□ -0.28
SNX18P12-201ENST00000624821 RNF216Q9NWF9 866 aaPredicted RBP13.27□□□□□ -0.29
SNX18P12-201ENST00000624821 CNKSR2Q8WXI2 1034 aa13.25□□□□□ -0.29
SNX18P12-201ENST00000624821 CC2D2AQ9P2K1 1620 aa13.14□□□□□ -0.31
SNX18P12-201ENST00000624821 CECR2Q9BXF3 1484 aa13.11□□□□□ -0.31
SNX18P12-201ENST00000624821 MYO15BQ96JP2 1530 aa13.08□□□□□ -0.31
SNX18P12-201ENST00000624821 POTEHQ6S545 545 aa13.03□□□□□ -0.32
SNX18P12-201ENST00000624821 DNAJC5Q9H3Z4 198 aa13.02□□□□□ -0.33
SNX18P12-201ENST00000624821 EIF4G1Q04637 1599 aaKnown RBP13.01□□□□□ -0.33
SNX18P12-201ENST00000624821 SHROOM4Q9ULL8 1493 aa12.97□□□□□ -0.33
SNX18P12-201ENST00000624821 SCRIBQ14160 1630 aa12.96□□□□□ -0.33
SNX18P12-201ENST00000624821 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNX18P12-201ENST00000624821 ZCCHC6Q5VYS8 1495 aaKnown RBP12.85□□□□□ -0.35
SNX18P12-201ENST00000624821 DCAF1Q9Y4B6 1507 aa12.8□□□□□ -0.36
SNX18P12-201ENST00000624821 NCBP3Q53F19 620 aaKnown RBP12.69□□□□□ -0.38
SNX18P12-201ENST00000624821 DSG3P32926 999 aa12.63□□□□□ -0.39
SNX18P12-201ENST00000624821 CUX2O14529 1486 aa12.62□□□□□ -0.39
SNX18P12-201ENST00000624821 CAPN15O75808 1086 aa12.61□□□□□ -0.39
SNX18P12-201ENST00000624821 SPINK5Q9NQ38 1064 aaPredicted RBP12.57□□□□□ -0.4
SNX18P12-201ENST00000624821 ERCC6Q03468 1493 aa12.55□□□□□ -0.4
SNX18P12-201ENST00000624821 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
SNX18P12-201ENST00000624821 NPM3O75607 178 aaKnown RBP12.47□□□□□ -0.41
SNX18P12-201ENST00000624821 NESP48681 1621 aa12.43□□□□□ -0.42
SNX18P12-201ENST00000624821 NCAPD3P42695 1498 aa12.39□□□□□ -0.43
SNX18P12-201ENST00000624821 THOC2Q8NI27 1593 aaKnown RBP12.38□□□□□ -0.43
SNX18P12-201ENST00000624821 TRIM41Q8WV44 630 aa12.37□□□□□ -0.43
SNX18P12-201ENST00000624821 ATAD2BQ9ULI0 1458 aa12.34□□□□□ -0.43
SNX18P12-201ENST00000624821 KIF21AQ7Z4S6 1674 aa12.32□□□□□ -0.44
SNX18P12-201ENST00000624821 HMGXB3Q12766 1538 aa12.3□□□□□ -0.44
SNX18P12-201ENST00000624821 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
SNX18P12-201ENST00000624821 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
SNX18P12-201ENST00000624821 TRHP20396 242 aaPredicted RBP12.27□□□□□ -0.45
SNX18P12-201ENST00000624821 ABCB7O75027 752 aa12.26□□□□□ -0.45
SNX18P12-201ENST00000624821 LAMC3Q9Y6N6 1575 aa12.22□□□□□ -0.45
SNX18P12-201ENST00000624821 BAZ1BQ9UIG0 1483 aaKnown RBP12.21□□□□□ -0.46
SNX18P12-201ENST00000624821 ZNF219Q9P2Y4 722 aaPredicted RBP12.19□□□□□ -0.46
SNX18P12-201ENST00000624821 APLP2Q06481 763 aa12.18□□□□□ -0.46
SNX18P12-201ENST00000624821 PEG3Q9GZU2 1588 aa12.12□□□□□ -0.47
SNX18P12-201ENST00000624821 BAZ1AQ9NRL2 1556 aaPredicted RBP12.12□□□□□ -0.47
SNX18P12-201ENST00000624821 PDS5BQ9NTI5 1447 aa12.1□□□□□ -0.47
SNX18P12-201ENST00000624821 RBM42Q9BTD8 480 aaKnown RBP12.09□□□□□ -0.47
SNX18P12-201ENST00000624821 MRC2Q9UBG0 1479 aa12.08□□□□□ -0.48
SNX18P12-201ENST00000624821 WDR62O43379 1518 aa12.07□□□□□ -0.48
SNX18P12-201ENST00000624821 SLC4A2P04920 1241 aa12.05□□□□□ -0.48
SNX18P12-201ENST00000624821 CHRDL2Q6WN34 429 aa12.05□□□□□ -0.48
SNX18P12-201ENST00000624821 MROH2BQ7Z745 1585 aa12.05□□□□□ -0.48
SNX18P12-201ENST00000624821 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.01□□□□□ -0.49
SNX18P12-201ENST00000624821 HNRNPUL2Q1KMD3 747 aaKnown RBP12.01□□□□□ -0.49
SNX18P12-201ENST00000624821 CADPSQ9ULU8 1353 aa12□□□□□ -0.49
SNX18P12-201ENST00000624821 RIMBP3CA6NJZ7 1639 aa11.97□□□□□ -0.49
SNX18P12-201ENST00000624821 RIMBP3BA6NNM3 1639 aa11.97□□□□□ -0.49
SNX18P12-201ENST00000624821 RIMBP3Q9UFD9 1639 aa11.97□□□□□ -0.49
SNX18P12-201ENST00000624821 CEP164Q9UPV0 1460 aa11.95□□□□□ -0.5
SNX18P12-201ENST00000624821 OSCARQ8IYS5 282 aa11.95□□□□□ -0.5
SNX18P12-201ENST00000624821 WIZO95785 1651 aa11.94□□□□□ -0.5
SNX18P12-201ENST00000624821 SP7Q8TDD2 431 aaPredicted RBP11.92□□□□□ -0.5
SNX18P12-201ENST00000624821 SAMD1Q6SPF0 538 aaPredicted RBP11.91□□□□□ -0.5
SNX18P12-201ENST00000624821 FANCD2Q9BXW9 1451 aa11.9□□□□□ -0.5
SNX18P12-201ENST00000624821 URB2Q14146 1524 aaKnown RBP11.86□□□□□ -0.51
SNX18P12-201ENST00000624821 ARHGEF11O15085 1522 aa11.85□□□□□ -0.51
SNX18P12-201ENST00000624821 CFTRP13569 1480 aa11.8□□□□□ -0.52
SNX18P12-201ENST00000624821 PRDM2Q13029 1718 aa11.8□□□□□ -0.52
SNX18P12-201ENST00000624821 ZNF608Q9ULD9 1512 aaPredicted RBP11.79□□□□□ -0.52
SNX18P12-201ENST00000624821 POLA2Q14181 598 aa11.78□□□□□ -0.52
SNX18P12-201ENST00000624821 CHD1O14646 1710 aa11.77□□□□□ -0.52
SNX18P12-201ENST00000624821 CYB5RLQ6IPT4 315 aa11.75□□□□□ -0.53
SNX18P12-201ENST00000624821 EIF4G3O43432 1585 aaKnown RBP11.73□□□□□ -0.53
SNX18P12-201ENST00000624821 ARAP1Q96P48 1450 aa11.72□□□□□ -0.53
SNX18P12-201ENST00000624821 IFT140Q96RY7 1462 aa11.7□□□□□ -0.54
SNX18P12-201ENST00000624821 KCNA4P22459 653 aa11.7□□□□□ -0.54
SNX18P12-201ENST00000624821 TOP2AP11388 1531 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms