Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC9.84□□□□□ -0.83
TOPBP1Q92547 AC063977.5-201ENST00000601044 974 ntBASIC9.84□□□□□ -0.83
TOPBP1Q92547 AC087763.1-201ENST00000603391 286 ntBASIC9.84□□□□□ -0.83
TOPBP1Q92547 AC126915.2-201ENST00000610957 190 ntBASIC9.84□□□□□ -0.83
TOPBP1Q92547 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC9.84□□□□□ -0.83
TOPBP1Q92547 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
TOPBP1Q92547 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
TOPBP1Q92547 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TOPBP1Q92547 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
TOPBP1Q92547 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TOPBP1Q92547 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
TOPBP1Q92547 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TOPBP1Q92547 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC9.84□□□□□ -0.83
TOPBP1Q92547 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC9.83□□□□□ -0.84
TOPBP1Q92547 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC9.83□□□□□ -0.84
TOPBP1Q92547 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
TOPBP1Q92547 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC9.83□□□□□ -0.84
TOPBP1Q92547 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC9.83□□□□□ -0.84
TOPBP1Q92547 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TOPBP1Q92547 AL731556.1-201ENST00000394628 3711 ntBASIC9.83□□□□□ -0.84
TOPBP1Q92547 SELE-203ENST00000367775 3389 ntTSL 5 BASIC9.83□□□□□ -0.84
TOPBP1Q92547 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC9.83□□□□□ -0.84
TOPBP1Q92547 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC9.83□□□□□ -0.84
TOPBP1Q92547 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC9.83□□□□□ -0.84
TOPBP1Q92547 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC9.83□□□□□ -0.84
TOPBP1Q92547 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC9.83□□□□□ -0.84
TOPBP1Q92547 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
TOPBP1Q92547 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC9.83□□□□□ -0.84
TOPBP1Q92547 AL049779.2-201ENST00000553847 315 ntBASIC9.83□□□□□ -0.84
TOPBP1Q92547 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC9.83□□□□□ -0.84
TOPBP1Q92547 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC9.83□□□□□ -0.84
TOPBP1Q92547 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TOPBP1Q92547 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
TOPBP1Q92547 AL161912.4-201ENST00000623889 2468 ntBASIC9.83□□□□□ -0.84
TOPBP1Q92547 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
TOPBP1Q92547 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
TOPBP1Q92547 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
TOPBP1Q92547 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
TOPBP1Q92547 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
TOPBP1Q92547 RNU6ATAC18P-201ENST00000408413 101 ntBASIC9.82□□□□□ -0.84
TOPBP1Q92547 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC9.82□□□□□ -0.84
TOPBP1Q92547 NENFP1-201ENST00000419476 466 ntBASIC9.82□□□□□ -0.84
TOPBP1Q92547 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC9.82□□□□□ -0.84
TOPBP1Q92547 Z80107.2-201ENST00000445127 392 ntBASIC9.82□□□□□ -0.84
TOPBP1Q92547 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
TOPBP1Q92547 AC112187.1-201ENST00000455837 479 ntBASIC9.82□□□□□ -0.84
TOPBP1Q92547 LDHBP2-201ENST00000456969 1005 ntBASIC9.82□□□□□ -0.84
TOPBP1Q92547 RN7SKP66-201ENST00000516681 231 ntBASIC9.82□□□□□ -0.84
TOPBP1Q92547 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC9.82□□□□□ -0.84
TOPBP1Q92547 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
TOPBP1Q92547 OR11J2P-201ENST00000555298 907 ntBASIC9.82□□□□□ -0.84
TOPBP1Q92547 MIR3691-201ENST00000578066 90 ntBASIC9.82□□□□□ -0.84
TOPBP1Q92547 AL390318.1-201ENST00000624564 687 ntBASIC9.82□□□□□ -0.84
TOPBP1Q92547 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
TOPBP1Q92547 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
TOPBP1Q92547 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
TOPBP1Q92547 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
TOPBP1Q92547 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
TOPBP1Q92547 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
TOPBP1Q92547 AC137056.2-201ENST00000624055 1958 ntBASIC9.82□□□□□ -0.84
TOPBP1Q92547 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC9.82□□□□□ -0.84
TOPBP1Q92547 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
TOPBP1Q92547 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
TOPBP1Q92547 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
TOPBP1Q92547 MTHFD2P5-201ENST00000320415 844 ntBASIC9.82□□□□□ -0.84
TOPBP1Q92547 GAPDHP42-201ENST00000406848 981 ntBASIC9.82□□□□□ -0.84
TOPBP1Q92547 RN7SKP279-201ENST00000411383 298 ntBASIC9.82□□□□□ -0.84
TOPBP1Q92547 AC090638.1-201ENST00000498296 909 ntBASIC9.82□□□□□ -0.84
TOPBP1Q92547 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
TOPBP1Q92547 IGHV1-14-201ENST00000523391 241 ntBASIC9.82□□□□□ -0.84
TOPBP1Q92547 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC9.82□□□□□ -0.84
TOPBP1Q92547 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
TOPBP1Q92547 AC011369.2-201ENST00000624423 1567 ntBASIC9.81□□□□□ -0.84
TOPBP1Q92547 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC9.81□□□□□ -0.84
TOPBP1Q92547 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
TOPBP1Q92547 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
TOPBP1Q92547 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
TOPBP1Q92547 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
TOPBP1Q92547 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
TOPBP1Q92547 RPL23P2-201ENST00000320371 421 ntBASIC9.81□□□□□ -0.84
TOPBP1Q92547 RNA5SP339-201ENST00000390987 122 ntBASIC9.81□□□□□ -0.84
TOPBP1Q92547 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
TOPBP1Q92547 FTH1P10-202ENST00000430907 550 ntBASIC9.81□□□□□ -0.84
TOPBP1Q92547 OFD1P10Y-201ENST00000434110 1433 ntBASIC9.81□□□□□ -0.84
TOPBP1Q92547 RPL21P133-201ENST00000443666 476 ntBASIC9.81□□□□□ -0.84
TOPBP1Q92547 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC9.81□□□□□ -0.84
TOPBP1Q92547 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC9.81□□□□□ -0.84
TOPBP1Q92547 FTH1P2-201ENST00000466086 412 ntBASIC9.81□□□□□ -0.84
TOPBP1Q92547 RPL38P3-201ENST00000484463 213 ntBASIC9.81□□□□□ -0.84
TOPBP1Q92547 AC022832.1-201ENST00000530718 645 ntBASIC9.81□□□□□ -0.84
TOPBP1Q92547 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
TOPBP1Q92547 HNRNPCP1-201ENST00000556181 766 ntBASIC9.81□□□□□ -0.84
TOPBP1Q92547 MIR4260-201ENST00000583107 67 ntBASIC9.81□□□□□ -0.84
TOPBP1Q92547 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC9.8□□□□□ -0.84
TOPBP1Q92547 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
TOPBP1Q92547 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
TOPBP1Q92547 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC9.8□□□□□ -0.84
TOPBP1Q92547 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
TOPBP1Q92547 AC105749.1-201ENST00000631338 2008 ntBASIC9.8□□□□□ -0.84
TOPBP1Q92547 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms