RNA–Protein interactions for RNA: ENST00000553847.2

AL049779.2-201, humanhuman

BASIC

Gene AL049779.2, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049779.2-201ENST00000553847 AEBP2Q6ZN18 517 aaPredicted RBP16.42■□□□□ 0.22
AL049779.2-201ENST00000553847 CHIC1Q5VXU3 224 aa16.04■□□□□ 0.16
AL049779.2-201ENST00000553847 PHF23Q9BUL5 403 aaPredicted RBP14.19□□□□□ -0.14
AL049779.2-201ENST00000553847 SENP3Q9H4L4 574 aaPredicted RBP13.77□□□□□ -0.21
AL049779.2-201ENST00000553847 NISCHQ9Y2I1 1504 aa13.35□□□□□ -0.27
AL049779.2-201ENST00000553847 PLPPR3Q6T4P5 718 aa13.02□□□□□ -0.33
AL049779.2-201ENST00000553847 FOXD1Q16676 465 aa12.87□□□□□ -0.35
AL049779.2-201ENST00000553847 PPP6R1Q9UPN7 881 aa12.51□□□□□ -0.41
AL049779.2-201ENST00000553847 ADRA2BP18089 450 aa12.49□□□□□ -0.41
AL049779.2-201ENST00000553847 PIAS4Q8N2W9 510 aaPredicted RBP12.12□□□□□ -0.47
AL049779.2-201ENST00000553847 CCDC180Q9P1Z9 1646 aa11.97□□□□□ -0.49
AL049779.2-201ENST00000553847 ABCC9O60706 1549 aa11.96□□□□□ -0.49
AL049779.2-201ENST00000553847 MSH5O43196 834 aa11.71□□□□□ -0.53
AL049779.2-201ENST00000553847 PPP4R3CPQ6ZMV5 832 aa11.54□□□□□ -0.56
AL049779.2-201ENST00000553847 RB1CC1Q8TDY2 1594 aa11.44□□□□□ -0.58
AL049779.2-201ENST00000553847 KCNA4P22459 653 aa11.43□□□□□ -0.58
AL049779.2-201ENST00000553847 NACADO15069 1562 aa11.37□□□□□ -0.59
AL049779.2-201ENST00000553847 MAPK8IP2Q13387 824 aaPredicted RBP11.33□□□□□ -0.6
AL049779.2-201ENST00000553847 DCAF8L2P0C7V8 631 aa11.32□□□□□ -0.6
AL049779.2-201ENST00000553847 SCAF1Q9H7N4 1312 aaKnown RBP11.25□□□□□ -0.61
AL049779.2-201ENST00000553847 MYO15BQ96JP2 1530 aa11.24□□□□□ -0.61
AL049779.2-201ENST00000553847 DNAJC5BQ9UF47 199 aa11.19□□□□□ -0.62
AL049779.2-201ENST00000553847 NCBP3Q53F19 620 aaKnown RBP11.16□□□□□ -0.62
AL049779.2-201ENST00000553847 PABPN1Q86U42 306 aaKnown RBP eCLIP11.16□□□□□ -0.62
AL049779.2-201ENST00000553847 CNKSR2Q8WXI2 1034 aa11.14□□□□□ -0.63
AL049779.2-201ENST00000553847 NPM3O75607 178 aaKnown RBP11.11□□□□□ -0.63
AL049779.2-201ENST00000553847 DCAF1Q9Y4B6 1507 aa11.07□□□□□ -0.64
AL049779.2-201ENST00000553847 ZCCHC6Q5VYS8 1495 aaKnown RBP11.06□□□□□ -0.64
AL049779.2-201ENST00000553847 DMRT2Q9Y5R5 561 aa11.04□□□□□ -0.64
AL049779.2-201ENST00000553847 SHROOM4Q9ULL8 1493 aa11.02□□□□□ -0.65
AL049779.2-201ENST00000553847 BICRAQ9NZM4 1560 aa11.01□□□□□ -0.65
AL049779.2-201ENST00000553847 UNC13AQ9UPW8 1703 aa11.01□□□□□ -0.65
AL049779.2-201ENST00000553847 RNF216Q9NWF9 866 aaPredicted RBP10.9□□□□□ -0.66
AL049779.2-201ENST00000553847 SCRIBQ14160 1630 aa10.87□□□□□ -0.67
AL049779.2-201ENST00000553847 HOXD11P31277 338 aaPredicted RBP10.85□□□□□ -0.67
AL049779.2-201ENST00000553847 SLC4A1APQ9BWU0 796 aaKnown RBP10.84□□□□□ -0.67
AL049779.2-201ENST00000553847 CECR2Q9BXF3 1484 aa10.82□□□□□ -0.68
AL049779.2-201ENST00000553847 CC2D2AQ9P2K1 1620 aa10.8□□□□□ -0.68
AL049779.2-201ENST00000553847 EIF4G1Q04637 1599 aaKnown RBP10.79□□□□□ -0.68
AL049779.2-201ENST00000553847 EHMT2Q96KQ7 1210 aa10.7□□□□□ -0.7
AL049779.2-201ENST00000553847 POTEDQ86YR6 584 aa10.6□□□□□ -0.71
AL049779.2-201ENST00000553847 DCAF8L1A6NGE4 600 aa10.59□□□□□ -0.71
AL049779.2-201ENST00000553847 ZBTB22O15209 634 aa10.56□□□□□ -0.72
AL049779.2-201ENST00000553847 CSRNP3Q8WYN3 585 aa10.54□□□□□ -0.72
AL049779.2-201ENST00000553847 SLC4A2P04920 1241 aa10.5□□□□□ -0.73
AL049779.2-201ENST00000553847 NCAPD3P42695 1498 aa10.49□□□□□ -0.73
AL049779.2-201ENST00000553847 SMARCA2P51531 1590 aa10.44□□□□□ -0.74
AL049779.2-201ENST00000553847 ATAD2BQ9ULI0 1458 aa10.43□□□□□ -0.74
AL049779.2-201ENST00000553847 FOXD4L1Q9NU39 408 aa10.41□□□□□ -0.74
AL049779.2-201ENST00000553847 ERCC6Q03468 1493 aa10.41□□□□□ -0.74
AL049779.2-201ENST00000553847 HMGXB3Q12766 1538 aa10.4□□□□□ -0.74
AL049779.2-201ENST00000553847 BAZ1AQ9NRL2 1556 aaPredicted RBP10.39□□□□□ -0.75
AL049779.2-201ENST00000553847 CUX2O14529 1486 aa10.39□□□□□ -0.75
AL049779.2-201ENST00000553847 SMARCA4P51532 1647 aa10.39□□□□□ -0.75
AL049779.2-201ENST00000553847 DNAJC5Q9H3Z4 198 aa10.38□□□□□ -0.75
AL049779.2-201ENST00000553847 BAZ1BQ9UIG0 1483 aaKnown RBP10.36□□□□□ -0.75
AL049779.2-201ENST00000553847 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.33□□□□□ -0.76
AL049779.2-201ENST00000553847 PEG3Q9GZU2 1588 aa10.31□□□□□ -0.76
AL049779.2-201ENST00000553847 PDS5BQ9NTI5 1447 aa10.25□□□□□ -0.77
AL049779.2-201ENST00000553847 LAMC3Q9Y6N6 1575 aa10.25□□□□□ -0.77
AL049779.2-201ENST00000553847 MROH2BQ7Z745 1585 aa10.24□□□□□ -0.77
AL049779.2-201ENST00000553847 NESP48681 1621 aa10.24□□□□□ -0.77
AL049779.2-201ENST00000553847 U3KPZ7 1027 aaPredicted RBP10.23□□□□□ -0.77
AL049779.2-201ENST00000553847 MYCNP04198 464 aaPredicted RBP10.2□□□□□ -0.78
AL049779.2-201ENST00000553847 CADPSQ9ULU8 1353 aa10.19□□□□□ -0.78
AL049779.2-201ENST00000553847 THOC2Q8NI27 1593 aaKnown RBP10.14□□□□□ -0.79
AL049779.2-201ENST00000553847 RNF39Q9H2S5 420 aa10.11□□□□□ -0.79
AL049779.2-201ENST00000553847 MRC2Q9UBG0 1479 aa10.1□□□□□ -0.79
AL049779.2-201ENST00000553847 WIZO95785 1651 aa10.09□□□□□ -0.79
AL049779.2-201ENST00000553847 CEP164Q9UPV0 1460 aa10.08□□□□□ -0.8
AL049779.2-201ENST00000553847 RSF1Q96T23 1441 aaPredicted RBP10.07□□□□□ -0.8
AL049779.2-201ENST00000553847 KIF21AQ7Z4S6 1674 aa10.07□□□□□ -0.8
AL049779.2-201ENST00000553847 ATF5Q9Y2D1 282 aaPredicted RBP10.06□□□□□ -0.8
AL049779.2-201ENST00000553847 WDR62O43379 1518 aa10.06□□□□□ -0.8
AL049779.2-201ENST00000553847 CFTRP13569 1480 aa10.05□□□□□ -0.8
AL049779.2-201ENST00000553847 FANCD2Q9BXW9 1451 aa10.04□□□□□ -0.8
AL049779.2-201ENST00000553847 TOP2AP11388 1531 aaKnown RBP10.03□□□□□ -0.8
AL049779.2-201ENST00000553847 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.99□□□□□ -0.81
AL049779.2-201ENST00000553847 HNRNPUL2Q1KMD3 747 aaKnown RBP9.99□□□□□ -0.81
AL049779.2-201ENST00000553847 SAMD1Q6SPF0 538 aaPredicted RBP9.99□□□□□ -0.81
AL049779.2-201ENST00000553847 ATXN8OSP0DMR3 200 aa9.98□□□□□ -0.81
AL049779.2-201ENST00000553847 OSCARQ8IYS5 282 aa9.95□□□□□ -0.82
AL049779.2-201ENST00000553847 SPINK5Q9NQ38 1064 aaPredicted RBP9.95□□□□□ -0.82
AL049779.2-201ENST00000553847 C1QBPQ07021 282 aaKnown RBP9.94□□□□□ -0.82
AL049779.2-201ENST00000553847 URB2Q14146 1524 aaKnown RBP9.92□□□□□ -0.82
AL049779.2-201ENST00000553847 CCDC88BA6NC98 1476 aa9.91□□□□□ -0.82
AL049779.2-201ENST00000553847 TRIM41Q8WV44 630 aa9.91□□□□□ -0.82
AL049779.2-201ENST00000553847 ABCC8Q09428 1581 aa9.91□□□□□ -0.82
AL049779.2-201ENST00000553847 IFT140Q96RY7 1462 aa9.89□□□□□ -0.83
AL049779.2-201ENST00000553847 PRDM2Q13029 1718 aa9.85□□□□□ -0.83
AL049779.2-201ENST00000553847 CAPN15O75808 1086 aa9.84□□□□□ -0.83
AL049779.2-201ENST00000553847 TRHP20396 242 aaPredicted RBP9.84□□□□□ -0.83
AL049779.2-201ENST00000553847 TOPBP1Q92547 1522 aa9.83□□□□□ -0.84
AL049779.2-201ENST00000553847 APLP2Q06481 763 aa9.83□□□□□ -0.84
AL049779.2-201ENST00000553847 DNMBPQ6XZF7 1577 aa9.8□□□□□ -0.84
AL049779.2-201ENST00000553847 ZNF608Q9ULD9 1512 aaPredicted RBP9.79□□□□□ -0.84
AL049779.2-201ENST00000553847 ZNF219Q9P2Y4 722 aaPredicted RBP9.79□□□□□ -0.84
AL049779.2-201ENST00000553847 CACNB1Q02641 598 aaPredicted RBP9.77□□□□□ -0.85
AL049779.2-201ENST00000553847 SOGA1O94964 1423 aa9.73□□□□□ -0.85
AL049779.2-201ENST00000553847 AQRO60306 1485 aaKnown RBP eCLIP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms