RNA–Protein interactions for RNA: ENST00000456969.2

LDHBP2-201, Transcript of lactate dehydrogenase B pseudogene 2, humanhuman

BASIC

Gene LDHBP2, Length 1,005 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP2-201ENST00000456969 AEBP2Q6ZN18 517 aaPredicted RBP28.68■■■□□ 2.18
LDHBP2-201ENST00000456969 CHIC1Q5VXU3 224 aa27.99■■■□□ 2.07
LDHBP2-201ENST00000456969 PHF23Q9BUL5 403 aaPredicted RBP24.64■■□□□ 1.54
LDHBP2-201ENST00000456969 SENP3Q9H4L4 574 aaPredicted RBP24.29■■□□□ 1.48
LDHBP2-201ENST00000456969 PLPPR3Q6T4P5 718 aa22.74■■□□□ 1.23
LDHBP2-201ENST00000456969 FOXD1Q16676 465 aa22.59■■□□□ 1.21
LDHBP2-201ENST00000456969 ADRA2BP18089 450 aa21.81■■□□□ 1.08
LDHBP2-201ENST00000456969 PPP6R1Q9UPN7 881 aa21.78■■□□□ 1.08
LDHBP2-201ENST00000456969 PIAS4Q8N2W9 510 aaPredicted RBP21.35■■□□□ 1.01
LDHBP2-201ENST00000456969 MSH5O43196 834 aa20.77■□□□□ 0.92
LDHBP2-201ENST00000456969 PPP4R3CPQ6ZMV5 832 aa20.09■□□□□ 0.81
LDHBP2-201ENST00000456969 SCAF1Q9H7N4 1312 aaKnown RBP19.88■□□□□ 0.77
LDHBP2-201ENST00000456969 MAPK8IP2Q13387 824 aaPredicted RBP19.79■□□□□ 0.76
LDHBP2-201ENST00000456969 KCNA4P22459 653 aa19.67■□□□□ 0.74
LDHBP2-201ENST00000456969 NCBP3Q53F19 620 aaKnown RBP19.55■□□□□ 0.72
LDHBP2-201ENST00000456969 CNKSR2Q8WXI2 1034 aa19.48■□□□□ 0.71
LDHBP2-201ENST00000456969 POTEDQ86YR6 584 aa19.39■□□□□ 0.69
LDHBP2-201ENST00000456969 DMRT2Q9Y5R5 561 aa19.38■□□□□ 0.69
LDHBP2-201ENST00000456969 NPM3O75607 178 aaKnown RBP19.26■□□□□ 0.67
LDHBP2-201ENST00000456969 RNF216Q9NWF9 866 aaPredicted RBP19.07■□□□□ 0.64
LDHBP2-201ENST00000456969 HOXD11P31277 338 aaPredicted RBP18.96■□□□□ 0.63
LDHBP2-201ENST00000456969 DCAF8L1A6NGE4 600 aa18.75■□□□□ 0.59
LDHBP2-201ENST00000456969 SLC4A1APQ9BWU0 796 aaKnown RBP18.74■□□□□ 0.59
LDHBP2-201ENST00000456969 DNAJC5BQ9UF47 199 aa18.48■□□□□ 0.55
LDHBP2-201ENST00000456969 EHMT2Q96KQ7 1210 aa18.32■□□□□ 0.52
LDHBP2-201ENST00000456969 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.21■□□□□ 0.51
LDHBP2-201ENST00000456969 SLC4A2P04920 1241 aa18.18■□□□□ 0.5
LDHBP2-201ENST00000456969 ZBTB22O15209 634 aa18.08■□□□□ 0.48
LDHBP2-201ENST00000456969 FOXD4L1Q9NU39 408 aa18.04■□□□□ 0.48
LDHBP2-201ENST00000456969 CSRNP3Q8WYN3 585 aa17.99■□□□□ 0.47
LDHBP2-201ENST00000456969 U3KPZ7 1027 aaPredicted RBP17.85■□□□□ 0.45
LDHBP2-201ENST00000456969 RNF39Q9H2S5 420 aa17.8■□□□□ 0.44
LDHBP2-201ENST00000456969 MYCNP04198 464 aaPredicted RBP17.78■□□□□ 0.44
LDHBP2-201ENST00000456969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.59■□□□□ 0.41
LDHBP2-201ENST00000456969 HNRNPUL2Q1KMD3 747 aaKnown RBP17.59■□□□□ 0.41
LDHBP2-201ENST00000456969 C1QBPQ07021 282 aaKnown RBP17.57■□□□□ 0.4
LDHBP2-201ENST00000456969 SAMD1Q6SPF0 538 aaPredicted RBP17.54■□□□□ 0.4
LDHBP2-201ENST00000456969 CACNB1Q02641 598 aaPredicted RBP17.44■□□□□ 0.38
LDHBP2-201ENST00000456969 APLP2Q06481 763 aa17.41■□□□□ 0.38
LDHBP2-201ENST00000456969 SPINK5Q9NQ38 1064 aaPredicted RBP17.4■□□□□ 0.38
LDHBP2-201ENST00000456969 CAPN15O75808 1086 aa17.37■□□□□ 0.37
LDHBP2-201ENST00000456969 ATF5Q9Y2D1 282 aaPredicted RBP17.37■□□□□ 0.37
LDHBP2-201ENST00000456969 ATXN8OSP0DMR3 200 aa17.34■□□□□ 0.37
LDHBP2-201ENST00000456969 TRHP20396 242 aaPredicted RBP17.31■□□□□ 0.36
LDHBP2-201ENST00000456969 ZNF219Q9P2Y4 722 aaPredicted RBP17.18■□□□□ 0.34
LDHBP2-201ENST00000456969 ABCB7O75027 752 aa17.07■□□□□ 0.32
LDHBP2-201ENST00000456969 POLA2Q14181 598 aa16.98■□□□□ 0.31
LDHBP2-201ENST00000456969 DSG3P32926 999 aa16.97■□□□□ 0.31
LDHBP2-201ENST00000456969 FBLN2P98095 1184 aa16.63■□□□□ 0.25
LDHBP2-201ENST00000456969 ZBTB12Q9Y330 459 aaPredicted RBP16.61■□□□□ 0.25
LDHBP2-201ENST00000456969 MKRN4PQ13434 485 aaPredicted RBP16.57■□□□□ 0.24
LDHBP2-201ENST00000456969 OSCARQ8IYS5 282 aa16.4■□□□□ 0.22
LDHBP2-201ENST00000456969 FKBP8Q14318 412 aa16.33■□□□□ 0.2
LDHBP2-201ENST00000456969 SPDYE4A6NLX3 237 aa16.25■□□□□ 0.19
LDHBP2-201ENST00000456969 ZNF692Q9BU19 519 aaPredicted RBP16.19■□□□□ 0.18
LDHBP2-201ENST00000456969 SPDYE2BA6NHP3 402 aa16.17■□□□□ 0.18
LDHBP2-201ENST00000456969 SPDYE6P0CI01 402 aa16.17■□□□□ 0.18
LDHBP2-201ENST00000456969 SPDYE2Q495Y8 402 aa16.17■□□□□ 0.18
LDHBP2-201ENST00000456969 RBM42Q9BTD8 480 aaKnown RBP16.15■□□□□ 0.18
LDHBP2-201ENST00000456969 SSUH2Q9Y2M2 353 aa16.02■□□□□ 0.16
LDHBP2-201ENST00000456969 PABPN1Q86U42 306 aaKnown RBP eCLIP15.99■□□□□ 0.15
LDHBP2-201ENST00000456969 AKT1S1Q96B36 256 aa15.96■□□□□ 0.15
LDHBP2-201ENST00000456969 REM2Q8IYK8 340 aaPredicted RBP15.86■□□□□ 0.13
LDHBP2-201ENST00000456969 PROM2Q8N271 834 aa15.83■□□□□ 0.12
LDHBP2-201ENST00000456969 CLEC11AQ9Y240 323 aa15.77■□□□□ 0.12
LDHBP2-201ENST00000456969 SPDYE1Q8NFV5 336 aaPredicted RBP15.73■□□□□ 0.11
LDHBP2-201ENST00000456969 PITPNM1O00562 1244 aa15.68■□□□□ 0.1
LDHBP2-201ENST00000456969 FBXO3Q9UK99 471 aa15.66■□□□□ 0.1
LDHBP2-201ENST00000456969 STAG3Q9UJ98 1225 aa15.65■□□□□ 0.1
LDHBP2-201ENST00000456969 PRR29P0C7W0 189 aa15.57■□□□□ 0.08
LDHBP2-201ENST00000456969 CHRDL2Q6WN34 429 aa15.52■□□□□ 0.08
LDHBP2-201ENST00000456969 VASPP50552 380 aaPredicted RBP15.47■□□□□ 0.07
LDHBP2-201ENST00000456969 MIER1Q8N108 512 aa15.46■□□□□ 0.07
LDHBP2-201ENST00000456969 PLCD3Q8N3E9 789 aa15.45■□□□□ 0.06
LDHBP2-201ENST00000456969 CHADLQ6NUI6 762 aa15.36■□□□□ 0.05
LDHBP2-201ENST00000456969 PLEKHG5O94827 1062 aa15.34■□□□□ 0.05
LDHBP2-201ENST00000456969 PIP4P2Q8N4L2 257 aa15.33■□□□□ 0.04
LDHBP2-201ENST00000456969 CREBZFQ9NS37 354 aa15.33■□□□□ 0.04
LDHBP2-201ENST00000456969 FXR2P51116 673 aaKnown RBP eCLIP15.32■□□□□ 0.04
LDHBP2-201ENST00000456969 PRKAR2AP13861 404 aaKnown RBP15.31■□□□□ 0.04
LDHBP2-201ENST00000456969 KLHL34Q8N239 644 aa15.31■□□□□ 0.04
LDHBP2-201ENST00000456969 IFNLR1Q8IU57 520 aaPredicted RBP15.27■□□□□ 0.04
LDHBP2-201ENST00000456969 POTEHQ6S545 545 aa15.25■□□□□ 0.03
LDHBP2-201ENST00000456969 ZBTB47Q9UFB7 747 aaPredicted RBP15.16■□□□□ 0.02
LDHBP2-201ENST00000456969 FARP1Q9Y4F1 1045 aaPredicted RBP15.14■□□□□ 0.01
LDHBP2-201ENST00000456969 MNX1P50219 401 aaPredicted RBP15.12■□□□□ 0.01
LDHBP2-201ENST00000456969 NPM1P06748 294 aaKnown RBP eCLIP15.09■□□□□ 0.01
LDHBP2-201ENST00000456969 SPOCK2Q92563 424 aa15.09■□□□□ 0.01
LDHBP2-201ENST00000456969 NUBP1P53384 320 aa14.97□□□□□ -0.01
LDHBP2-201ENST00000456969 DCAF8Q5TAQ9 597 aa14.94□□□□□ -0.02
LDHBP2-201ENST00000456969 RASEFQ8IZ41 740 aa14.94□□□□□ -0.02
LDHBP2-201ENST00000456969 CIZ1Q9ULV3 898 aaPredicted RBP14.94□□□□□ -0.02
LDHBP2-201ENST00000456969 TSPYL2Q9H2G4 693 aaPredicted RBP14.93□□□□□ -0.02
LDHBP2-201ENST00000456969 HAX1O00165 279 aa14.91□□□□□ -0.02
LDHBP2-201ENST00000456969 FAM212AQ96EL1 285 aa14.88□□□□□ -0.03
LDHBP2-201ENST00000456969 CD44P16070 742 aaKnown RBP14.87□□□□□ -0.03
LDHBP2-201ENST00000456969 RTN4Q9NQC3 1192 aaKnown RBP14.86□□□□□ -0.03
LDHBP2-201ENST00000456969 PAK3O75914 559 aaPredicted RBP14.85□□□□□ -0.03
LDHBP2-201ENST00000456969 AMER1Q5JTC6 1135 aaPredicted RBP14.83□□□□□ -0.04
LDHBP2-201ENST00000456969 GSE1Q14687 1217 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 248.9 ms