RNA–Protein interactions for RNA: ENST00000538351.6

ZNF438-208, Transcript of zinc finger protein 438, human

APPRIS ALT2 TSL 2 BASIC

Gene ZNF438, Length 3,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF438-208	ENST00000538351	PELP1	Q8IZL8	1130 aa	Known RBP	13.87	□□□□□ -0.19
ZNF438-208	ENST00000538351	NISCH	Q9Y2I1	1504 aa		13.83	□□□□□ -0.2
ZNF438-208	ENST00000538351	MYT1	Q01538	1121 aa		13.51	□□□□□ -0.25
ZNF438-208	ENST00000538351	HRC	P23327	699 aa		13.45	□□□□□ -0.26
ZNF438-208	ENST00000538351	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.17	□□□□□ -0.3
ZNF438-208	ENST00000538351	SCAF1	Q9H7N4	1312 aa	Known RBP	13.06	□□□□□ -0.32
ZNF438-208	ENST00000538351	PCGF6	Q9BYE7	350 aa		12.92	□□□□□ -0.34
ZNF438-208	ENST00000538351	TTBK1	Q5TCY1	1321 aa	Predicted RBP	12.84	□□□□□ -0.35
ZNF438-208	ENST00000538351	BCL11A	Q9H165	835 aa		12.58	□□□□□ -0.4
ZNF438-208	ENST00000538351	ACIN1	Q9UKV3	1341 aa	Known RBP	12.56	□□□□□ -0.4
ZNF438-208	ENST00000538351	PRKCSH	P14314	528 aa	Predicted RBP	12.54	□□□□□ -0.4
ZNF438-208	ENST00000538351	MYO15B	Q96JP2	1530 aa		12.52	□□□□□ -0.4
ZNF438-208	ENST00000538351	GTF3C3	Q9Y5Q9	886 aa		12.51	□□□□□ -0.41
ZNF438-208	ENST00000538351	NEUROD1	Q13562	356 aa		12.5	□□□□□ -0.41
ZNF438-208	ENST00000538351	FAM9A	Q8IZU1	332 aa	Predicted RBP	12.45	□□□□□ -0.42
ZNF438-208	ENST00000538351	CENPB	P07199	599 aa	Predicted RBP	12.45	□□□□□ -0.42
ZNF438-208	ENST00000538351	ZEB1	P37275	1124 aa	Predicted RBP	12.42	□□□□□ -0.42
ZNF438-208	ENST00000538351	TRIM26	Q12899	539 aa	Predicted RBP	12.31	□□□□□ -0.44
ZNF438-208	ENST00000538351	DCAF1	Q9Y4B6	1507 aa		12.29	□□□□□ -0.44
ZNF438-208	ENST00000538351	SUPT5H	O00267	1087 aa	Known RBP	12.25	□□□□□ -0.45
ZNF438-208	ENST00000538351	ERICH6	Q7L0X2	663 aa		12.24	□□□□□ -0.45
ZNF438-208	ENST00000538351	CCDC180	Q9P1Z9	1646 aa		12.24	□□□□□ -0.45
ZNF438-208	ENST00000538351	CHIC1	Q5VXU3	224 aa		12.2	□□□□□ -0.46
ZNF438-208	ENST00000538351	ANP32E	Q9BTT0	268 aa		12.18	□□□□□ -0.46
ZNF438-208	ENST00000538351	APLP2	Q06481	763 aa		12.11	□□□□□ -0.47
ZNF438-208	ENST00000538351	CSRNP3	Q8WYN3	585 aa		12.07	□□□□□ -0.48
ZNF438-208	ENST00000538351	SHROOM4	Q9ULL8	1493 aa		12.05	□□□□□ -0.48
ZNF438-208	ENST00000538351	DIEXF	Q68CQ4	756 aa	Known RBP	12.04	□□□□□ -0.48
ZNF438-208	ENST00000538351	LOC105371045	A0A1W2PR82	267 aa		12.01	□□□□□ -0.49
ZNF438-208	ENST00000538351	YTHDC1	Q96MU7	727 aa	Known RBP	11.96	□□□□□ -0.49
ZNF438-208	ENST00000538351	TSHZ2	Q9NRE2	1034 aa		11.85	□□□□□ -0.51
ZNF438-208	ENST00000538351	CCER1	Q8TC90	406 aa	Predicted RBP	11.77	□□□□□ -0.53
ZNF438-208	ENST00000538351	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.76	□□□□□ -0.53
ZNF438-208	ENST00000538351	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.75	□□□□□ -0.53
ZNF438-208	ENST00000538351	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.74	□□□□□ -0.53
ZNF438-208	ENST00000538351	TRIM41	Q8WV44	630 aa		11.73	□□□□□ -0.53
ZNF438-208	ENST00000538351	CLSPN	Q9HAW4	1339 aa		11.67	□□□□□ -0.54
ZNF438-208	ENST00000538351	MIER1	Q8N108	512 aa		11.66	□□□□□ -0.54
ZNF438-208	ENST00000538351	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.64	□□□□□ -0.55
ZNF438-208	ENST00000538351	ZCCHC6	Q5VYS8	1495 aa	Known RBP	11.63	□□□□□ -0.55
ZNF438-208	ENST00000538351	UBE2Q2	Q8WVN8	375 aa		11.55	□□□□□ -0.56
ZNF438-208	ENST00000538351	SALL2	Q9Y467	1007 aa	Predicted RBP	11.54	□□□□□ -0.56
ZNF438-208	ENST00000538351	RBM19	Q9Y4C8	960 aa	Known RBP	11.52	□□□□□ -0.57
ZNF438-208	ENST00000538351	CCDC136	Q96JN2	1154 aa		11.51	□□□□□ -0.57
ZNF438-208	ENST00000538351	DCAF8L2	P0C7V8	631 aa		11.48	□□□□□ -0.57
ZNF438-208	ENST00000538351	SLC24A1	O60721	1099 aa		11.48	□□□□□ -0.57
ZNF438-208	ENST00000538351	EIF5B	O60841	1220 aa	Known RBP	11.47	□□□□□ -0.57
ZNF438-208	ENST00000538351	MSH5	O43196	834 aa		11.47	□□□□□ -0.57
ZNF438-208	ENST00000538351	DEK	P35659	375 aa	Known RBP	11.47	□□□□□ -0.57
ZNF438-208	ENST00000538351	BCAN	Q96GW7	911 aa		11.46	□□□□□ -0.57
ZNF438-208	ENST00000538351	MYT1L	Q9UL68	1186 aa		11.45	□□□□□ -0.58
ZNF438-208	ENST00000538351	ERICH6B	Q5W0A0	696 aa		11.41	□□□□□ -0.58
ZNF438-208	ENST00000538351	EHMT2	Q96KQ7	1210 aa		11.36	□□□□□ -0.59
ZNF438-208	ENST00000538351	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.36	□□□□□ -0.59
ZNF438-208	ENST00000538351	FKBP8	Q14318	412 aa		11.33	□□□□□ -0.6
ZNF438-208	ENST00000538351	PKNOX2	Q96KN3	472 aa		11.31	□□□□□ -0.6
ZNF438-208	ENST00000538351	FANCI	Q9NVI1	1328 aa		11.3	□□□□□ -0.6
ZNF438-208	ENST00000538351	ITGAE	P38570	1179 aa		11.27	□□□□□ -0.61
ZNF438-208	ENST00000538351	RTN4	Q9NQC3	1192 aa	Known RBP	11.27	□□□□□ -0.61
ZNF438-208	ENST00000538351	PLEKHG5	O94827	1062 aa		11.26	□□□□□ -0.61
ZNF438-208	ENST00000538351	NACAD	O15069	1562 aa		11.25	□□□□□ -0.61
ZNF438-208	ENST00000538351	ABCC9	O60706	1549 aa		11.24	□□□□□ -0.61
ZNF438-208	ENST00000538351	IL27	Q8NEV9	243 aa		11.24	□□□□□ -0.61
ZNF438-208	ENST00000538351	DAXX	Q9UER7	740 aa	Predicted RBP	11.24	□□□□□ -0.61
ZNF438-208	ENST00000538351	NEFL	P07196	543 aa		11.22	□□□□□ -0.61
ZNF438-208	ENST00000538351	NBR1	Q14596	966 aa		11.2	□□□□□ -0.62
ZNF438-208	ENST00000538351	PODXL2	Q9NZ53	605 aa		11.18	□□□□□ -0.62
ZNF438-208	ENST00000538351	RB1CC1	Q8TDY2	1594 aa		11.17	□□□□□ -0.62
ZNF438-208	ENST00000538351	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.13	□□□□□ -0.63
ZNF438-208	ENST00000538351	AEBP2	Q6ZN18	517 aa	Predicted RBP	11.11	□□□□□ -0.63
ZNF438-208	ENST00000538351	KCNH8	Q96L42	1107 aa		11.1	□□□□□ -0.63
ZNF438-208	ENST00000538351	RTL5	Q5HYW3	569 aa	Predicted RBP	11.09	□□□□□ -0.63
ZNF438-208	ENST00000538351	NOP58	Q9Y2X3	529 aa	Known RBP	11.08	□□□□□ -0.64
ZNF438-208	ENST00000538351	SCRIB	Q14160	1630 aa		11.05	□□□□□ -0.64
ZNF438-208	ENST00000538351	PAK3	O75914	559 aa	Predicted RBP	11.02	□□□□□ -0.65
ZNF438-208	ENST00000538351	TIMELESS	Q9UNS1	1208 aa		10.99	□□□□□ -0.65
ZNF438-208	ENST00000538351	HNRNPUL2	Q1KMD3	747 aa	Known RBP	10.98	□□□□□ -0.65
ZNF438-208	ENST00000538351	GLIPR1L2	Q4G1C9	344 aa		10.98	□□□□□ -0.65
ZNF438-208	ENST00000538351	ZMYND15	Q9H091	742 aa		10.96	□□□□□ -0.65
ZNF438-208	ENST00000538351	TRIM52	Q96A61	297 aa		10.94	□□□□□ -0.66
ZNF438-208	ENST00000538351	VSIG10	Q8N0Z9	540 aa		10.94	□□□□□ -0.66
ZNF438-208	ENST00000538351	WRN	Q14191	1432 aa	Predicted RBP eCLIP	10.93	□□□□□ -0.66
ZNF438-208	ENST00000538351	UNC13A	Q9UPW8	1703 aa		10.93	□□□□□ -0.66
ZNF438-208	ENST00000538351	IRX6	P78412	446 aa	Predicted RBP	10.92	□□□□□ -0.66
ZNF438-208	ENST00000538351	C11orf95	C9JLR9	678 aa	Predicted RBP	10.9	□□□□□ -0.66
ZNF438-208	ENST00000538351	RSPH6A	Q9H0K4	717 aa		10.9	□□□□□ -0.67
ZNF438-208	ENST00000538351	BRPF3	Q9ULD4	1205 aa		10.89	□□□□□ -0.67
ZNF438-208	ENST00000538351	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.87	□□□□□ -0.67
ZNF438-208	ENST00000538351	WASHC2A	Q641Q2	1341 aa		10.87	□□□□□ -0.67
ZNF438-208	ENST00000538351	ANP32A	P39687	249 aa	Known RBP	10.85	□□□□□ -0.67
ZNF438-208	ENST00000538351	IPO9	Q96P70	1041 aa	Known RBP	10.85	□□□□□ -0.67
ZNF438-208	ENST00000538351	WASHC2C	Q9Y4E1	1318 aa		10.84	□□□□□ -0.67
ZNF438-208	ENST00000538351		A0A0U1RQG5	324 aa	Predicted RBP	10.82	□□□□□ -0.68
ZNF438-208	ENST00000538351	NEFM	P07197	916 aa		10.82	□□□□□ -0.68
ZNF438-208	ENST00000538351	RSF1	Q96T23	1441 aa	Predicted RBP	10.82	□□□□□ -0.68
ZNF438-208	ENST00000538351	PPP4R2	Q9NY27	417 aa		10.82	□□□□□ -0.68
ZNF438-208	ENST00000538351	CEP162	Q5TB80	1403 aa		10.8	□□□□□ -0.68
ZNF438-208	ENST00000538351	DDX10	Q13206	875 aa	Known RBP	10.79	□□□□□ -0.68
ZNF438-208	ENST00000538351	CECR2	Q9BXF3	1484 aa		10.79	□□□□□ -0.68
ZNF438-208	ENST00000538351	USP35	Q9P2H5	1018 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms