RNA–Protein interactions for RNA: ENST00000305817.2

PRND-201, Transcript of prion like protein doppel, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRND, Length 3,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRND-201ENST00000305817 NISCHQ9Y2I1 1504 aa13.95□□□□□ -0.18
PRND-201ENST00000305817 DCAF8L2P0C7V8 631 aa13.23□□□□□ -0.29
PRND-201ENST00000305817 SHROOM4Q9ULL8 1493 aa12.68□□□□□ -0.38
PRND-201ENST00000305817 SUPT5HO00267 1087 aaKnown RBP12.53□□□□□ -0.4
PRND-201ENST00000305817 CCDC180Q9P1Z9 1646 aa12.18□□□□□ -0.46
PRND-201ENST00000305817 SLC24A1O60721 1099 aa12.11□□□□□ -0.47
PRND-201ENST00000305817 EHMT2Q96KQ7 1210 aa12.08□□□□□ -0.48
PRND-201ENST00000305817 CHIC1Q5VXU3 224 aa11.87□□□□□ -0.51
PRND-201ENST00000305817 ZCCHC6Q5VYS8 1495 aaKnown RBP11.87□□□□□ -0.51
PRND-201ENST00000305817 ABCC9O60706 1549 aa11.82□□□□□ -0.52
PRND-201ENST00000305817 FAM9AQ8IZU1 332 aaPredicted RBP11.78□□□□□ -0.52
PRND-201ENST00000305817 DCAF1Q9Y4B6 1507 aa11.72□□□□□ -0.53
PRND-201ENST00000305817 PABPN1Q86U42 306 aaKnown RBP eCLIP11.68□□□□□ -0.54
PRND-201ENST00000305817 TTBK1Q5TCY1 1321 aaPredicted RBP11.53□□□□□ -0.56
PRND-201ENST00000305817 RANGAP1P46060 587 aaPredicted RBP11.5□□□□□ -0.57
PRND-201ENST00000305817 LOC105371045A0A1W2PR82 267 aa11.45□□□□□ -0.58
PRND-201ENST00000305817 TRIM41Q8WV44 630 aa11.45□□□□□ -0.58
PRND-201ENST00000305817 MYO15BQ96JP2 1530 aa11.44□□□□□ -0.58
PRND-201ENST00000305817 PPARGC1BQ86YN6 1023 aaKnown RBP11.4□□□□□ -0.58
PRND-201ENST00000305817 PCGF6Q9BYE7 350 aa11.35□□□□□ -0.59
PRND-201ENST00000305817 SCRIBQ14160 1630 aa11.19□□□□□ -0.62
PRND-201ENST00000305817 UBTFP17480 764 aaKnown RBP11.18□□□□□ -0.62
PRND-201ENST00000305817 ATP1B4Q9UN42 357 aaPredicted RBP11.09□□□□□ -0.63
PRND-201ENST00000305817 NACADO15069 1562 aa11.08□□□□□ -0.64
PRND-201ENST00000305817 PELP1Q8IZL8 1130 aaKnown RBP11.03□□□□□ -0.64
PRND-201ENST00000305817 APLP2Q06481 763 aa11□□□□□ -0.65
PRND-201ENST00000305817 PLPPR3Q6T4P5 718 aa11□□□□□ -0.65
PRND-201ENST00000305817 AEBP2Q6ZN18 517 aaPredicted RBP11□□□□□ -0.65
PRND-201ENST00000305817 RTN4Q9NQC3 1192 aaKnown RBP10.97□□□□□ -0.65
PRND-201ENST00000305817 RB1CC1Q8TDY2 1594 aa10.95□□□□□ -0.66
PRND-201ENST00000305817 CECR2Q9BXF3 1484 aa10.94□□□□□ -0.66
PRND-201ENST00000305817 RSF1Q96T23 1441 aaPredicted RBP10.91□□□□□ -0.66
PRND-201ENST00000305817 UNC13AQ9UPW8 1703 aa10.9□□□□□ -0.66
PRND-201ENST00000305817 FBLN2P98095 1184 aa10.9□□□□□ -0.67
PRND-201ENST00000305817 EIF4G1Q04637 1599 aaKnown RBP10.89□□□□□ -0.67
PRND-201ENST00000305817 ITGAEP38570 1179 aa10.87□□□□□ -0.67
PRND-201ENST00000305817 DAXXQ9UER7 740 aaPredicted RBP10.84□□□□□ -0.67
PRND-201ENST00000305817 CCER1Q8TC90 406 aaPredicted RBP10.83□□□□□ -0.68
PRND-201ENST00000305817 BAZ1AQ9NRL2 1556 aaPredicted RBP10.82□□□□□ -0.68
PRND-201ENST00000305817 AMER1Q5JTC6 1135 aaPredicted RBP10.82□□□□□ -0.68
PRND-201ENST00000305817 HNRNPUL2Q1KMD3 747 aaKnown RBP10.82□□□□□ -0.68
PRND-201ENST00000305817 P3H3Q8IVL6 736 aa10.78□□□□□ -0.68
PRND-201ENST00000305817 TRIM26Q12899 539 aaPredicted RBP10.78□□□□□ -0.68
PRND-201ENST00000305817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.76□□□□□ -0.69
PRND-201ENST00000305817 MYT1Q01538 1121 aa10.76□□□□□ -0.69
PRND-201ENST00000305817 MROH2BQ7Z745 1585 aa10.75□□□□□ -0.69
PRND-201ENST00000305817 ARID3CA6NKF2 412 aa10.75□□□□□ -0.69
PRND-201ENST00000305817 WIZO95785 1651 aa10.74□□□□□ -0.69
PRND-201ENST00000305817 HRCP23327 699 aa10.74□□□□□ -0.69
PRND-201ENST00000305817 CSRNP3Q8WYN3 585 aa10.72□□□□□ -0.69
PRND-201ENST00000305817 NCBP3Q53F19 620 aaKnown RBP10.7□□□□□ -0.7
PRND-201ENST00000305817 PEG3Q9GZU2 1588 aa10.68□□□□□ -0.7
PRND-201ENST00000305817 SMARCA4P51532 1647 aa10.68□□□□□ -0.7
PRND-201ENST00000305817 TOP2AP11388 1531 aaKnown RBP10.66□□□□□ -0.7
PRND-201ENST00000305817 BICRAQ9NZM4 1560 aa10.62□□□□□ -0.71
PRND-201ENST00000305817 MYT1LQ9UL68 1186 aa10.62□□□□□ -0.71
PRND-201ENST00000305817 DNAJC5BQ9UF47 199 aa10.6□□□□□ -0.71
PRND-201ENST00000305817 SMARCA2P51531 1590 aa10.59□□□□□ -0.71
PRND-201ENST00000305817 KCNA4P22459 653 aa10.56□□□□□ -0.72
PRND-201ENST00000305817 PHF23Q9BUL5 403 aaPredicted RBP10.55□□□□□ -0.72
PRND-201ENST00000305817 PRKCSHP14314 528 aaPredicted RBP10.54□□□□□ -0.72
PRND-201ENST00000305817 FAM50AQ14320 339 aaKnown RBP10.54□□□□□ -0.72
PRND-201ENST00000305817 BAZ1BQ9UIG0 1483 aaKnown RBP10.51□□□□□ -0.73
PRND-201ENST00000305817 SOGA1O94964 1423 aa10.51□□□□□ -0.73
PRND-201ENST00000305817 YTHDC1Q96MU7 727 aaKnown RBP10.51□□□□□ -0.73
PRND-201ENST00000305817 CCDC88BA6NC98 1476 aa10.51□□□□□ -0.73
PRND-201ENST00000305817 ABCC8Q09428 1581 aa10.5□□□□□ -0.73
PRND-201ENST00000305817 CNGB1Q14028 1251 aaPredicted RBP10.49□□□□□ -0.73
PRND-201ENST00000305817 ERICH6Q7L0X2 663 aa10.45□□□□□ -0.74
PRND-201ENST00000305817 WRNQ14191 1432 aaPredicted RBP eCLIP10.45□□□□□ -0.74
PRND-201ENST00000305817 ZEB1P37275 1124 aaPredicted RBP10.43□□□□□ -0.74
PRND-201ENST00000305817 NEUROD1Q13562 356 aa10.42□□□□□ -0.74
PRND-201ENST00000305817 ERCC6Q03468 1493 aa10.4□□□□□ -0.74
PRND-201ENST00000305817 CENPBP07199 599 aaPredicted RBP10.4□□□□□ -0.75
PRND-201ENST00000305817 RUSC2Q8N2Y8 1516 aa10.38□□□□□ -0.75
PRND-201ENST00000305817 PRDM2Q13029 1718 aa10.37□□□□□ -0.75
PRND-201ENST00000305817 CHMP7Q8WUX9 453 aaPredicted RBP10.36□□□□□ -0.75
PRND-201ENST00000305817 POLR3GLQ9BT43 218 aa10.35□□□□□ -0.75
PRND-201ENST00000305817 ZNF777Q9ULD5 760 aaPredicted RBP10.35□□□□□ -0.75
PRND-201ENST00000305817 ATAD2BQ9ULI0 1458 aa10.35□□□□□ -0.75
PRND-201ENST00000305817 EEA1Q15075 1411 aa10.35□□□□□ -0.75
PRND-201ENST00000305817 TRHP20396 242 aaPredicted RBP10.34□□□□□ -0.75
PRND-201ENST00000305817 KIF21BO75037 1637 aa10.34□□□□□ -0.75
PRND-201ENST00000305817 BIVM-ERCC5R4GMW8 1640 aa10.34□□□□□ -0.75
PRND-201ENST00000305817 TRIM52Q96A61 297 aa10.33□□□□□ -0.76
PRND-201ENST00000305817 CHIC2Q9UKJ5 165 aa10.33□□□□□ -0.76
PRND-201ENST00000305817 CEP162Q5TB80 1403 aa10.32□□□□□ -0.76
PRND-201ENST00000305817 SLC4A1APQ9BWU0 796 aaKnown RBP10.32□□□□□ -0.76
PRND-201ENST00000305817 CLIP1P30622 1438 aa10.31□□□□□ -0.76
PRND-201ENST00000305817 TDRD9Q8NDG6 1382 aaKnown RBP10.31□□□□□ -0.76
PRND-201ENST00000305817 ARXQ96QS3 562 aa10.29□□□□□ -0.76
PRND-201ENST00000305817 HMGXB3Q12766 1538 aa10.28□□□□□ -0.76
PRND-201ENST00000305817 SYNJ1O43426 1573 aa10.28□□□□□ -0.76
PRND-201ENST00000305817 SCAF1Q9H7N4 1312 aaKnown RBP10.28□□□□□ -0.76
PRND-201ENST00000305817 TULP1O00294 542 aaPredicted RBP10.27□□□□□ -0.77
PRND-201ENST00000305817 TOP2BQ02880 1626 aa10.26□□□□□ -0.77
PRND-201ENST00000305817 KANK4Q5T7N3 995 aaPredicted RBP10.25□□□□□ -0.77
PRND-201ENST00000305817 ZNF326Q5BKZ1 582 aaKnown RBP10.25□□□□□ -0.77
PRND-201ENST00000305817 NPM1P06748 294 aaKnown RBP eCLIP10.24□□□□□ -0.77
PRND-201ENST00000305817 HIRIP3Q9BW71 556 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms