Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RPL7AP28-201ENST00000464513 571 ntBASIC3.59□□□□□ -1.83
APOBP04114 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC3.59□□□□□ -1.83
APOBP04114 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC3.59□□□□□ -1.83
APOBP04114 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC3.59□□□□□ -1.83
APOBP04114 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC3.59□□□□□ -1.83
APOBP04114 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.59□□□□□ -1.83
APOBP04114 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC3.59□□□□□ -1.83
APOBP04114 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC3.59□□□□□ -1.83
APOBP04114 AP002799.1-201ENST00000623552 423 ntBASIC3.59□□□□□ -1.83
APOBP04114 AL353662.3-201ENST00000625131 237 ntBASIC3.59□□□□□ -1.83
APOBP04114 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC3.59□□□□□ -1.83
APOBP04114 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
APOBP04114 SLITRK1-201ENST00000377084 5189 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
APOBP04114 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 TTL-201ENST00000233336 14269 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 NAV2-201ENST00000349880 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
APOBP04114 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
APOBP04114 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 AL390774.1-201ENST00000411924 246 ntBASIC3.59□□□□□ -1.83
APOBP04114 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC3.59□□□□□ -1.83
APOBP04114 NMD3P2-201ENST00000421815 761 ntBASIC3.59□□□□□ -1.83
APOBP04114 RPL7P11-201ENST00000437586 658 ntBASIC3.59□□□□□ -1.83
APOBP04114 AC092647.3-201ENST00000443044 633 ntBASIC3.59□□□□□ -1.83
APOBP04114 AC011753.3-201ENST00000443436 406 ntBASIC3.59□□□□□ -1.83
APOBP04114 CEACAMP7-201ENST00000444105 496 ntBASIC3.59□□□□□ -1.83
APOBP04114 RN7SL385P-201ENST00000468873 276 ntBASIC3.59□□□□□ -1.83
APOBP04114 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC3.59□□□□□ -1.83
APOBP04114 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC3.59□□□□□ -1.83
APOBP04114 AC068790.4-201ENST00000602474 263 ntBASIC3.59□□□□□ -1.83
APOBP04114 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC3.59□□□□□ -1.83
APOBP04114 AC024255.1-201ENST00000614376 102 ntBASIC3.59□□□□□ -1.83
APOBP04114 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC3.59□□□□□ -1.83
APOBP04114 AC116631.1-202ENST00000640984 683 ntBASIC3.59□□□□□ -1.83
APOBP04114 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC3.59□□□□□ -1.83
APOBP04114 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 BIVM-ERCC5-201ENST00000602836 5143 ntAPPRIS P5 TSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC3.59□□□□□ -1.83
APOBP04114 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC3.59□□□□□ -1.83
APOBP04114 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
APOBP04114 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
APOBP04114 ST8SIA3-201ENST00000324000 11833 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
APOBP04114 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
APOBP04114 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
APOBP04114 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
APOBP04114 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
APOBP04114 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
APOBP04114 SLC16A1-AS1-204ENST00000428411 8757 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
APOBP04114 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
APOBP04114 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
APOBP04114 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
APOBP04114 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
APOBP04114 AC104837.2-201ENST00000427236 424 ntBASIC3.59□□□□□ -1.84
APOBP04114 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.59□□□□□ -1.84
APOBP04114 HMGB3P24-201ENST00000433260 622 ntBASIC3.59□□□□□ -1.84
APOBP04114 AC134698.5-201ENST00000519444 336 ntBASIC3.59□□□□□ -1.84
APOBP04114 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.59□□□□□ -1.84
APOBP04114 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC3.59□□□□□ -1.84
APOBP04114 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
APOBP04114 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
APOBP04114 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
APOBP04114 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC3.59□□□□□ -1.84
APOBP04114 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
APOBP04114 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
APOBP04114 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
APOBP04114 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 AF131215.2-201ENST00000531549 1710 ntBASIC3.58□□□□□ -1.84
APOBP04114 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 AL133243.4-201ENST00000623116 3109 ntBASIC3.58□□□□□ -1.84
APOBP04114 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
APOBP04114 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
APOBP04114 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.58□□□□□ -1.84
APOBP04114 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC3.58□□□□□ -1.84
APOBP04114 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.58□□□□□ -1.84
APOBP04114 AC010343.2-201ENST00000510162 224 ntBASIC3.58□□□□□ -1.84
APOBP04114 MIR2117-201ENST00000516780 80 ntBASIC3.58□□□□□ -1.84
APOBP04114 AC139365.2-201ENST00000517972 253 ntBASIC3.58□□□□□ -1.84
APOBP04114 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC3.58□□□□□ -1.84
APOBP04114 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 DDHD1-210ENST00000612692 12339 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
APOBP04114 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 TRPM8-204ENST00000433712 5291 ntTSL 5 BASIC3.58□□□□□ -1.84
APOBP04114 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
APOBP04114 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms