RNA–Protein interactions for RNA: ENST00000421815.1

NMD3P2-201, Transcript of NMD3 ribosome export adaptor pseudogene 2, humanhuman

BASIC

Gene NMD3P2, Length 761 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3P2-201ENST00000421815 AEBP2Q6ZN18 517 aaPredicted RBP16.56■□□□□ 0.24
NMD3P2-201ENST00000421815 CHIC1Q5VXU3 224 aa16.12■□□□□ 0.17
NMD3P2-201ENST00000421815 SENP3Q9H4L4 574 aaPredicted RBP14.29□□□□□ -0.12
NMD3P2-201ENST00000421815 PHF23Q9BUL5 403 aaPredicted RBP14.25□□□□□ -0.13
NMD3P2-201ENST00000421815 NISCHQ9Y2I1 1504 aa14.13□□□□□ -0.15
NMD3P2-201ENST00000421815 FOXD1Q16676 465 aa13.19□□□□□ -0.3
NMD3P2-201ENST00000421815 PLPPR3Q6T4P5 718 aa13.19□□□□□ -0.3
NMD3P2-201ENST00000421815 CCDC180Q9P1Z9 1646 aa12.57□□□□□ -0.4
NMD3P2-201ENST00000421815 ADRA2BP18089 450 aa12.49□□□□□ -0.41
NMD3P2-201ENST00000421815 PPP6R1Q9UPN7 881 aa12.49□□□□□ -0.41
NMD3P2-201ENST00000421815 MSH5O43196 834 aa12.48□□□□□ -0.41
NMD3P2-201ENST00000421815 PIAS4Q8N2W9 510 aaPredicted RBP12.37□□□□□ -0.43
NMD3P2-201ENST00000421815 POTEDQ86YR6 584 aa12.21□□□□□ -0.45
NMD3P2-201ENST00000421815 ABCC9O60706 1549 aa11.91□□□□□ -0.5
NMD3P2-201ENST00000421815 ZCCHC6Q5VYS8 1495 aaKnown RBP11.86□□□□□ -0.51
NMD3P2-201ENST00000421815 KCNA4P22459 653 aa11.78□□□□□ -0.52
NMD3P2-201ENST00000421815 DCAF1Q9Y4B6 1507 aa11.71□□□□□ -0.53
NMD3P2-201ENST00000421815 PPP4R3CPQ6ZMV5 832 aa11.69□□□□□ -0.54
NMD3P2-201ENST00000421815 NACADO15069 1562 aa11.66□□□□□ -0.54
NMD3P2-201ENST00000421815 MYO15BQ96JP2 1530 aa11.65□□□□□ -0.54
NMD3P2-201ENST00000421815 RB1CC1Q8TDY2 1594 aa11.63□□□□□ -0.55
NMD3P2-201ENST00000421815 DCAF8L2P0C7V8 631 aa11.61□□□□□ -0.55
NMD3P2-201ENST00000421815 UNC13AQ9UPW8 1703 aa11.5□□□□□ -0.57
NMD3P2-201ENST00000421815 SCRIBQ14160 1630 aa11.46□□□□□ -0.57
NMD3P2-201ENST00000421815 SCAF1Q9H7N4 1312 aaKnown RBP11.41□□□□□ -0.58
NMD3P2-201ENST00000421815 NCBP3Q53F19 620 aaKnown RBP11.41□□□□□ -0.58
NMD3P2-201ENST00000421815 SHROOM4Q9ULL8 1493 aa11.33□□□□□ -0.6
NMD3P2-201ENST00000421815 DMRT2Q9Y5R5 561 aa11.31□□□□□ -0.6
NMD3P2-201ENST00000421815 NPM3O75607 178 aaKnown RBP11.3□□□□□ -0.6
NMD3P2-201ENST00000421815 EHMT2Q96KQ7 1210 aa11.28□□□□□ -0.6
NMD3P2-201ENST00000421815 CNKSR2Q8WXI2 1034 aa11.27□□□□□ -0.61
NMD3P2-201ENST00000421815 MAPK8IP2Q13387 824 aaPredicted RBP11.26□□□□□ -0.61
NMD3P2-201ENST00000421815 BICRAQ9NZM4 1560 aa11.24□□□□□ -0.61
NMD3P2-201ENST00000421815 SLC4A1APQ9BWU0 796 aaKnown RBP11.23□□□□□ -0.61
NMD3P2-201ENST00000421815 PABPN1Q86U42 306 aaKnown RBP eCLIP11.09□□□□□ -0.63
NMD3P2-201ENST00000421815 CSRNP3Q8WYN3 585 aa11.02□□□□□ -0.65
NMD3P2-201ENST00000421815 RNF216Q9NWF9 866 aaPredicted RBP10.98□□□□□ -0.65
NMD3P2-201ENST00000421815 BAZ1AQ9NRL2 1556 aaPredicted RBP10.98□□□□□ -0.65
NMD3P2-201ENST00000421815 SMARCA4P51532 1647 aa10.98□□□□□ -0.65
NMD3P2-201ENST00000421815 CECR2Q9BXF3 1484 aa10.95□□□□□ -0.66
NMD3P2-201ENST00000421815 EIF4G1Q04637 1599 aaKnown RBP10.94□□□□□ -0.66
NMD3P2-201ENST00000421815 HOXD11P31277 338 aaPredicted RBP10.91□□□□□ -0.66
NMD3P2-201ENST00000421815 MROH2BQ7Z745 1585 aa10.9□□□□□ -0.67
NMD3P2-201ENST00000421815 DNAJC5BQ9UF47 199 aa10.87□□□□□ -0.67
NMD3P2-201ENST00000421815 WIZO95785 1651 aa10.87□□□□□ -0.67
NMD3P2-201ENST00000421815 ZBTB22O15209 634 aa10.86□□□□□ -0.67
NMD3P2-201ENST00000421815 CC2D2AQ9P2K1 1620 aa10.84□□□□□ -0.67
NMD3P2-201ENST00000421815 RSF1Q96T23 1441 aaPredicted RBP10.84□□□□□ -0.67
NMD3P2-201ENST00000421815 PEG3Q9GZU2 1588 aa10.83□□□□□ -0.68
NMD3P2-201ENST00000421815 SMARCA2P51531 1590 aa10.82□□□□□ -0.68
NMD3P2-201ENST00000421815 SUPT5HO00267 1087 aaKnown RBP10.76□□□□□ -0.69
NMD3P2-201ENST00000421815 ATAD2BQ9ULI0 1458 aa10.75□□□□□ -0.69
NMD3P2-201ENST00000421815 HMGXB3Q12766 1538 aa10.75□□□□□ -0.69
NMD3P2-201ENST00000421815 TOP2AP11388 1531 aaKnown RBP10.74□□□□□ -0.69
NMD3P2-201ENST00000421815 DCAF8L1A6NGE4 600 aa10.74□□□□□ -0.69
NMD3P2-201ENST00000421815 BAZ1BQ9UIG0 1483 aaKnown RBP10.74□□□□□ -0.69
NMD3P2-201ENST00000421815 FOXD4L1Q9NU39 408 aa10.71□□□□□ -0.69
NMD3P2-201ENST00000421815 NCAPD3P42695 1498 aa10.68□□□□□ -0.7
NMD3P2-201ENST00000421815 SLC4A2P04920 1241 aa10.63□□□□□ -0.71
NMD3P2-201ENST00000421815 PRDM2Q13029 1718 aa10.59□□□□□ -0.71
NMD3P2-201ENST00000421815 CACNB1Q02641 598 aaPredicted RBP10.58□□□□□ -0.72
NMD3P2-201ENST00000421815 RNF39Q9H2S5 420 aa10.58□□□□□ -0.72
NMD3P2-201ENST00000421815 CCDC88BA6NC98 1476 aa10.55□□□□□ -0.72
NMD3P2-201ENST00000421815 C1QBPQ07021 282 aaKnown RBP10.49□□□□□ -0.73
NMD3P2-201ENST00000421815 LAMC3Q9Y6N6 1575 aa10.45□□□□□ -0.74
NMD3P2-201ENST00000421815 KIF21AQ7Z4S6 1674 aa10.41□□□□□ -0.74
NMD3P2-201ENST00000421815 MYCNP04198 464 aaPredicted RBP10.4□□□□□ -0.74
NMD3P2-201ENST00000421815 CFTRP13569 1480 aa10.4□□□□□ -0.74
NMD3P2-201ENST00000421815 NESP48681 1621 aa10.39□□□□□ -0.75
NMD3P2-201ENST00000421815 CADPSQ9ULU8 1353 aa10.38□□□□□ -0.75
NMD3P2-201ENST00000421815 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.35□□□□□ -0.75
NMD3P2-201ENST00000421815 ABCC8Q09428 1581 aa10.32□□□□□ -0.76
NMD3P2-201ENST00000421815 FANCD2Q9BXW9 1451 aa10.31□□□□□ -0.76
NMD3P2-201ENST00000421815 CEP164Q9UPV0 1460 aa10.3□□□□□ -0.76
NMD3P2-201ENST00000421815 PDS5BQ9NTI5 1447 aa10.3□□□□□ -0.76
NMD3P2-201ENST00000421815 BIVM-ERCC5R4GMW8 1640 aa10.29□□□□□ -0.76
NMD3P2-201ENST00000421815 ATXN8OSP0DMR3 200 aa10.28□□□□□ -0.76
NMD3P2-201ENST00000421815 SYNJ1O43426 1573 aa10.26□□□□□ -0.77
NMD3P2-201ENST00000421815 ERCC6Q03468 1493 aa10.26□□□□□ -0.77
NMD3P2-201ENST00000421815 TOP2BQ02880 1626 aa10.25□□□□□ -0.77
NMD3P2-201ENST00000421815 U3KPZ7 1027 aaPredicted RBP10.25□□□□□ -0.77
NMD3P2-201ENST00000421815 THOC2Q8NI27 1593 aaKnown RBP10.25□□□□□ -0.77
NMD3P2-201ENST00000421815 WRNQ14191 1432 aaPredicted RBP eCLIP10.24□□□□□ -0.77
NMD3P2-201ENST00000421815 DNMBPQ6XZF7 1577 aa10.24□□□□□ -0.77
NMD3P2-201ENST00000421815 CUX1P39880 1505 aa10.23□□□□□ -0.77
NMD3P2-201ENST00000421815 MRC2Q9UBG0 1479 aa10.22□□□□□ -0.77
NMD3P2-201ENST00000421815 URB2Q14146 1524 aaKnown RBP10.2□□□□□ -0.78
NMD3P2-201ENST00000421815 WDR62O43379 1518 aa10.19□□□□□ -0.78
NMD3P2-201ENST00000421815 TOPBP1Q92547 1522 aa10.19□□□□□ -0.78
NMD3P2-201ENST00000421815 ATF5Q9Y2D1 282 aaPredicted RBP10.18□□□□□ -0.78
NMD3P2-201ENST00000421815 WDR97A6NE52 1622 aa10.16□□□□□ -0.78
NMD3P2-201ENST00000421815 FGD5Q6ZNL6 1462 aa10.15□□□□□ -0.78
NMD3P2-201ENST00000421815 TRIM41Q8WV44 630 aa10.14□□□□□ -0.79
NMD3P2-201ENST00000421815 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.13□□□□□ -0.79
NMD3P2-201ENST00000421815 HNRNPUL2Q1KMD3 747 aaKnown RBP10.13□□□□□ -0.79
NMD3P2-201ENST00000421815 SAMD1Q6SPF0 538 aaPredicted RBP10.13□□□□□ -0.79
NMD3P2-201ENST00000421815 POLA1P09884 1462 aaPredicted RBP10.11□□□□□ -0.79
NMD3P2-201ENST00000421815 TARBP1Q13395 1621 aaKnown RBP10.09□□□□□ -0.79
NMD3P2-201ENST00000421815 PBRM1Q86U86 1689 aa10.08□□□□□ -0.8
NMD3P2-201ENST00000421815 ABCA5Q8WWZ7 1642 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms