RNA–Protein interactions for RNA: ENST00000408909.6

TRPM3-215, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRPM3, Length 4,701 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-215ENST00000408909 PELP1Q8IZL8 1130 aaKnown RBP15.75■□□□□ 0.11
TRPM3-215ENST00000408909 DCAF8L2P0C7V8 631 aa15.34■□□□□ 0.05
TRPM3-215ENST00000408909 NISCHQ9Y2I1 1504 aa15.27■□□□□ 0.04
TRPM3-215ENST00000408909 MYT1Q01538 1121 aa15.18■□□□□ 0.02
TRPM3-215ENST00000408909 CCER1Q8TC90 406 aaPredicted RBP15□□□□□ -0.01
TRPM3-215ENST00000408909 ERICH6Q7L0X2 663 aa14.9□□□□□ -0.02
TRPM3-215ENST00000408909 APLP2Q06481 763 aa14.71□□□□□ -0.05
TRPM3-215ENST00000408909 CENPBP07199 599 aaPredicted RBP14.66□□□□□ -0.06
TRPM3-215ENST00000408909 FAM9AQ8IZU1 332 aaPredicted RBP14.64□□□□□ -0.07
TRPM3-215ENST00000408909 SUPT5HO00267 1087 aaKnown RBP14.62□□□□□ -0.07
TRPM3-215ENST00000408909 HRCP23327 699 aa14.57□□□□□ -0.08
TRPM3-215ENST00000408909 NEFLP07196 543 aa14.42□□□□□ -0.1
TRPM3-215ENST00000408909 YTHDC1Q96MU7 727 aaKnown RBP14.41□□□□□ -0.1
TRPM3-215ENST00000408909 ZEB1P37275 1124 aaPredicted RBP14.39□□□□□ -0.11
TRPM3-215ENST00000408909 PCGF6Q9BYE7 350 aa14.33□□□□□ -0.11
TRPM3-215ENST00000408909 DAXXQ9UER7 740 aaPredicted RBP14.2□□□□□ -0.14
TRPM3-215ENST00000408909 TTBK1Q5TCY1 1321 aaPredicted RBP14.19□□□□□ -0.14
TRPM3-215ENST00000408909 EHMT2Q96KQ7 1210 aa14.17□□□□□ -0.14
TRPM3-215ENST00000408909 SHROOM4Q9ULL8 1493 aa14.17□□□□□ -0.14
TRPM3-215ENST00000408909 PPARGC1BQ86YN6 1023 aaKnown RBP14.13□□□□□ -0.15
TRPM3-215ENST00000408909 SCAF1Q9H7N4 1312 aaKnown RBP13.87□□□□□ -0.19
TRPM3-215ENST00000408909 RTL5Q5HYW3 569 aaPredicted RBP13.86□□□□□ -0.19
TRPM3-215ENST00000408909 TRIM26Q12899 539 aaPredicted RBP13.8□□□□□ -0.2
TRPM3-215ENST00000408909 ATP1B4Q9UN42 357 aaPredicted RBP13.75□□□□□ -0.21
TRPM3-215ENST00000408909 ZNF316A6NFI3 1004 aaPredicted RBP13.74□□□□□ -0.21
TRPM3-215ENST00000408909 GTF3C3Q9Y5Q9 886 aa13.72□□□□□ -0.21
TRPM3-215ENST00000408909 ACIN1Q9UKV3 1341 aaKnown RBP13.71□□□□□ -0.21
TRPM3-215ENST00000408909 CHIC1Q5VXU3 224 aa13.67□□□□□ -0.22
TRPM3-215ENST00000408909 TRIM41Q8WV44 630 aa13.64□□□□□ -0.23
TRPM3-215ENST00000408909 UBTFP17480 764 aaKnown RBP13.64□□□□□ -0.23
TRPM3-215ENST00000408909 CLSPNQ9HAW4 1339 aa13.63□□□□□ -0.23
TRPM3-215ENST00000408909 RANGAP1P46060 587 aaPredicted RBP13.59□□□□□ -0.23
TRPM3-215ENST00000408909 BCL11AQ9H165 835 aa13.5□□□□□ -0.25
TRPM3-215ENST00000408909 NEUROD1Q13562 356 aa13.47□□□□□ -0.25
TRPM3-215ENST00000408909 POLR3GLQ9BT43 218 aa13.46□□□□□ -0.25
TRPM3-215ENST00000408909 ZBTB47Q9UFB7 747 aaPredicted RBP13.44□□□□□ -0.26
TRPM3-215ENST00000408909 MYT1LQ9UL68 1186 aa13.41□□□□□ -0.26
TRPM3-215ENST00000408909 DIEXFQ68CQ4 756 aaKnown RBP13.41□□□□□ -0.26
TRPM3-215ENST00000408909 LOC105371045A0A1W2PR82 267 aa13.4□□□□□ -0.26
TRPM3-215ENST00000408909 DCAF1Q9Y4B6 1507 aa13.39□□□□□ -0.27
TRPM3-215ENST00000408909 GLIPR1L2Q4G1C9 344 aa13.38□□□□□ -0.27
TRPM3-215ENST00000408909 CDK11AQ9UQ88 783 aaPredicted RBP13.3□□□□□ -0.28
TRPM3-215ENST00000408909 ANP32BQ92688 251 aaKnown RBP13.29□□□□□ -0.28
TRPM3-215ENST00000408909 ANP32EQ9BTT0 268 aa13.29□□□□□ -0.28
TRPM3-215ENST00000408909 SLC4A1APQ9BWU0 796 aaKnown RBP13.28□□□□□ -0.28
TRPM3-215ENST00000408909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.25□□□□□ -0.29
TRPM3-215ENST00000408909 HNRNPUL2Q1KMD3 747 aaKnown RBP13.25□□□□□ -0.29
TRPM3-215ENST00000408909 ITGAEP38570 1179 aa13.19□□□□□ -0.3
TRPM3-215ENST00000408909 NEFMP07197 916 aa13.16□□□□□ -0.3
TRPM3-215ENST00000408909 ANP32AP39687 249 aaKnown RBP13.16□□□□□ -0.3
TRPM3-215ENST00000408909 CNGB1Q14028 1251 aaPredicted RBP13.16□□□□□ -0.3
TRPM3-215ENST00000408909 EIF5BO60841 1220 aaKnown RBP13.14□□□□□ -0.31
TRPM3-215ENST00000408909 PRKCSHP14314 528 aaPredicted RBP13.14□□□□□ -0.31
TRPM3-215ENST00000408909 MYO15BQ96JP2 1530 aa13.1□□□□□ -0.31
TRPM3-215ENST00000408909 CCDC180Q9P1Z9 1646 aa13.09□□□□□ -0.31
TRPM3-215ENST00000408909 ANP32CO43423 234 aa13.08□□□□□ -0.32
TRPM3-215ENST00000408909 CANXP27824 592 aaKnown RBP13.08□□□□□ -0.32
TRPM3-215ENST00000408909 UPF2Q9HAU5 1272 aaKnown RBP13.01□□□□□ -0.33
TRPM3-215ENST00000408909 HSP90AA1P07900 732 aaKnown RBP13□□□□□ -0.33
TRPM3-215ENST00000408909 CDK11BP21127 795 aaKnown RBP12.96□□□□□ -0.33
TRPM3-215ENST00000408909 CSRNP3Q8WYN3 585 aa12.96□□□□□ -0.33
TRPM3-215ENST00000408909 BCANQ96GW7 911 aa12.94□□□□□ -0.34
TRPM3-215ENST00000408909 TRIM52Q96A61 297 aa12.92□□□□□ -0.34
TRPM3-215ENST00000408909 TNNT2P45379 298 aaPredicted RBP12.92□□□□□ -0.34
TRPM3-215ENST00000408909 SLC24A1O60721 1099 aa12.9□□□□□ -0.34
TRPM3-215ENST00000408909 ZCCHC6Q5VYS8 1495 aaKnown RBP12.88□□□□□ -0.35
TRPM3-215ENST00000408909 FAM50AQ14320 339 aaKnown RBP12.84□□□□□ -0.35
TRPM3-215ENST00000408909 NPM2Q86SE8 214 aaKnown RBP12.8□□□□□ -0.36
TRPM3-215ENST00000408909 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.78□□□□□ -0.36
TRPM3-215ENST00000408909 ZNF326Q5BKZ1 582 aaKnown RBP12.76□□□□□ -0.37
TRPM3-215ENST00000408909 SUPT16HQ9Y5B9 1047 aaKnown RBP12.76□□□□□ -0.37
TRPM3-215ENST00000408909 TSHZ2Q9NRE2 1034 aa12.76□□□□□ -0.37
TRPM3-215ENST00000408909 MIER1Q8N108 512 aa12.76□□□□□ -0.37
TRPM3-215ENST00000408909 TRIM44Q96DX7 344 aaPredicted RBP12.75□□□□□ -0.37
TRPM3-215ENST00000408909 NCLP19338 710 aaKnown RBP12.7□□□□□ -0.38
TRPM3-215ENST00000408909 GOLGA6L22H0YM25 854 aa12.68□□□□□ -0.38
TRPM3-215ENST00000408909 FKBP8Q14318 412 aa12.67□□□□□ -0.38
TRPM3-215ENST00000408909 ERICH6BQ5W0A0 696 aa12.65□□□□□ -0.38
TRPM3-215ENST00000408909 BECN1Q14457 450 aa12.63□□□□□ -0.39
TRPM3-215ENST00000408909 CCDC136Q96JN2 1154 aa12.62□□□□□ -0.39
TRPM3-215ENST00000408909 ZRSR1Q15695 479 aaKnown RBP12.62□□□□□ -0.39
TRPM3-215ENST00000408909 DEKP35659 375 aaKnown RBP12.62□□□□□ -0.39
TRPM3-215ENST00000408909 DDRGK1Q96HY6 314 aa12.61□□□□□ -0.39
TRPM3-215ENST00000408909 MYH16Q9H6N6 1097 aa12.6□□□□□ -0.39
TRPM3-215ENST00000408909 RBM19Q9Y4C8 960 aaKnown RBP12.59□□□□□ -0.39
TRPM3-215ENST00000408909 NRDCO43847 1150 aa12.56□□□□□ -0.4
TRPM3-215ENST00000408909 ESF1Q9H501 851 aaKnown RBP12.55□□□□□ -0.4
TRPM3-215ENST00000408909 NBR1Q14596 966 aa12.55□□□□□ -0.4
TRPM3-215ENST00000408909 PTMAP06454 111 aaKnown RBP12.54□□□□□ -0.4
TRPM3-215ENST00000408909 HNRNPUQ00839 825 aaKnown RBP eCLIP12.54□□□□□ -0.4
TRPM3-215ENST00000408909 DNTTIP2Q5QJE6 756 aaKnown RBP12.51□□□□□ -0.41
TRPM3-215ENST00000408909 ANO8Q9HCE9 1232 aaPredicted RBP12.51□□□□□ -0.41
TRPM3-215ENST00000408909 PPM1GO15355 546 aaPredicted RBP12.5□□□□□ -0.41
TRPM3-215ENST00000408909 GOLGA6L6A8MZA4 724 aa12.49□□□□□ -0.41
TRPM3-215ENST00000408909 L1TD1Q5T7N2 865 aaKnown RBP12.49□□□□□ -0.41
TRPM3-215ENST00000408909 ARXQ96QS3 562 aa12.49□□□□□ -0.41
TRPM3-215ENST00000408909 TMC1Q8TDI8 760 aa12.49□□□□□ -0.41
TRPM3-215ENST00000408909 WDR43Q15061 677 aaKnown RBP eCLIP12.47□□□□□ -0.41
TRPM3-215ENST00000408909 TONSLQ96HA7 1378 aa12.45□□□□□ -0.42
TRPM3-215ENST00000408909 RTN4Q9NQC3 1192 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms