RNA–Protein interactions for RNA: ENST00000533575.5

LINC01493-202, Transcript of long intergenic non-protein coding RNA 1493, humanhuman

TSL 4 BASIC

Gene LINC01493, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01493-202ENST00000533575 AEBP2Q6ZN18 517 aaPredicted RBP20.62■□□□□ 0.89
LINC01493-202ENST00000533575 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
LINC01493-202ENST00000533575 PHF23Q9BUL5 403 aaPredicted RBP17.49■□□□□ 0.39
LINC01493-202ENST00000533575 SENP3Q9H4L4 574 aaPredicted RBP17.43■□□□□ 0.38
LINC01493-202ENST00000533575 FOXD1Q16676 465 aa16.28■□□□□ 0.2
LINC01493-202ENST00000533575 PLPPR3Q6T4P5 718 aa15.97■□□□□ 0.15
LINC01493-202ENST00000533575 PPP6R1Q9UPN7 881 aa15.53■□□□□ 0.08
LINC01493-202ENST00000533575 ADRA2BP18089 450 aa15.47■□□□□ 0.07
LINC01493-202ENST00000533575 PIAS4Q8N2W9 510 aaPredicted RBP15.25■□□□□ 0.03
LINC01493-202ENST00000533575 MSH5O43196 834 aa15.01□□□□□ -0.01
LINC01493-202ENST00000533575 POTEDQ86YR6 584 aa14.42□□□□□ -0.1
LINC01493-202ENST00000533575 NISCHQ9Y2I1 1504 aa14.4□□□□□ -0.1
LINC01493-202ENST00000533575 MAPK8IP2Q13387 824 aaPredicted RBP14.13□□□□□ -0.15
LINC01493-202ENST00000533575 PPP4R3CPQ6ZMV5 832 aa14.08□□□□□ -0.16
LINC01493-202ENST00000533575 SCAF1Q9H7N4 1312 aaKnown RBP14.03□□□□□ -0.16
LINC01493-202ENST00000533575 DMRT2Q9Y5R5 561 aa13.9□□□□□ -0.18
LINC01493-202ENST00000533575 CNKSR2Q8WXI2 1034 aa13.71□□□□□ -0.21
LINC01493-202ENST00000533575 NCBP3Q53F19 620 aaKnown RBP13.57□□□□□ -0.24
LINC01493-202ENST00000533575 KCNA4P22459 653 aa13.53□□□□□ -0.24
LINC01493-202ENST00000533575 HOXD11P31277 338 aaPredicted RBP13.53□□□□□ -0.24
LINC01493-202ENST00000533575 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
LINC01493-202ENST00000533575 NPM3O75607 178 aaKnown RBP13.46□□□□□ -0.25
LINC01493-202ENST00000533575 DCAF8L1A6NGE4 600 aa13.31□□□□□ -0.28
LINC01493-202ENST00000533575 DNAJC5BQ9UF47 199 aa13.06□□□□□ -0.32
LINC01493-202ENST00000533575 RNF39Q9H2S5 420 aa12.89□□□□□ -0.35
LINC01493-202ENST00000533575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC01493-202ENST00000533575 SLC4A2P04920 1241 aa12.8□□□□□ -0.36
LINC01493-202ENST00000533575 SLC4A1APQ9BWU0 796 aaKnown RBP12.79□□□□□ -0.36
LINC01493-202ENST00000533575 CACNB1Q02641 598 aaPredicted RBP12.71□□□□□ -0.37
LINC01493-202ENST00000533575 C1QBPQ07021 282 aaKnown RBP12.68□□□□□ -0.38
LINC01493-202ENST00000533575 U3KPZ7 1027 aaPredicted RBP12.68□□□□□ -0.38
LINC01493-202ENST00000533575 ZBTB22O15209 634 aa12.47□□□□□ -0.41
LINC01493-202ENST00000533575 FOXD4L1Q9NU39 408 aa12.46□□□□□ -0.41
LINC01493-202ENST00000533575 SPINK5Q9NQ38 1064 aaPredicted RBP12.42□□□□□ -0.42
LINC01493-202ENST00000533575 CCDC180Q9P1Z9 1646 aa12.4□□□□□ -0.42
LINC01493-202ENST00000533575 MYCNP04198 464 aaPredicted RBP12.39□□□□□ -0.43
LINC01493-202ENST00000533575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.33□□□□□ -0.44
LINC01493-202ENST00000533575 HNRNPUL2Q1KMD3 747 aaKnown RBP12.33□□□□□ -0.44
LINC01493-202ENST00000533575 CAPN15O75808 1086 aa12.32□□□□□ -0.44
LINC01493-202ENST00000533575 ZCCHC6Q5VYS8 1495 aaKnown RBP12.32□□□□□ -0.44
LINC01493-202ENST00000533575 SAMD1Q6SPF0 538 aaPredicted RBP12.3□□□□□ -0.44
LINC01493-202ENST00000533575 HRCP23327 699 aa12.23□□□□□ -0.45
LINC01493-202ENST00000533575 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
LINC01493-202ENST00000533575 APLP2Q06481 763 aa12.22□□□□□ -0.45
LINC01493-202ENST00000533575 DSG3P32926 999 aa12.2□□□□□ -0.46
LINC01493-202ENST00000533575 CSRNP3Q8WYN3 585 aa12.19□□□□□ -0.46
LINC01493-202ENST00000533575 EHMT2Q96KQ7 1210 aa12.19□□□□□ -0.46
LINC01493-202ENST00000533575 ATF5Q9Y2D1 282 aaPredicted RBP12.18□□□□□ -0.46
LINC01493-202ENST00000533575 ZNF219Q9P2Y4 722 aaPredicted RBP12.16□□□□□ -0.46
LINC01493-202ENST00000533575 MYO15BQ96JP2 1530 aa12.13□□□□□ -0.47
LINC01493-202ENST00000533575 DCAF1Q9Y4B6 1507 aa12.11□□□□□ -0.47
LINC01493-202ENST00000533575 SHROOM4Q9ULL8 1493 aa12.11□□□□□ -0.47
LINC01493-202ENST00000533575 ABCB7O75027 752 aa12.1□□□□□ -0.47
LINC01493-202ENST00000533575 ATXN8OSP0DMR3 200 aa12.01□□□□□ -0.49
LINC01493-202ENST00000533575 POLA2Q14181 598 aa11.98□□□□□ -0.49
LINC01493-202ENST00000533575 SUPT5HO00267 1087 aaKnown RBP11.97□□□□□ -0.49
LINC01493-202ENST00000533575 PELP1Q8IZL8 1130 aaKnown RBP11.86□□□□□ -0.51
LINC01493-202ENST00000533575 PCGF6Q9BYE7 350 aa11.8□□□□□ -0.52
LINC01493-202ENST00000533575 ABCC9O60706 1549 aa11.78□□□□□ -0.52
LINC01493-202ENST00000533575 ZEB1P37275 1124 aaPredicted RBP11.69□□□□□ -0.54
LINC01493-202ENST00000533575 PPARGC1BQ86YN6 1023 aaKnown RBP11.69□□□□□ -0.54
LINC01493-202ENST00000533575 TRIM26Q12899 539 aaPredicted RBP11.67□□□□□ -0.54
LINC01493-202ENST00000533575 ZBTB12Q9Y330 459 aaPredicted RBP11.67□□□□□ -0.54
LINC01493-202ENST00000533575 MKRN4PQ13434 485 aaPredicted RBP11.62□□□□□ -0.55
LINC01493-202ENST00000533575 OSCARQ8IYS5 282 aa11.58□□□□□ -0.56
LINC01493-202ENST00000533575 FBLN2P98095 1184 aa11.56□□□□□ -0.56
LINC01493-202ENST00000533575 RBM42Q9BTD8 480 aaKnown RBP11.55□□□□□ -0.56
LINC01493-202ENST00000533575 RB1CC1Q8TDY2 1594 aa11.53□□□□□ -0.56
LINC01493-202ENST00000533575 MYT1Q01538 1121 aa11.46□□□□□ -0.57
LINC01493-202ENST00000533575 LOC105371045A0A1W2PR82 267 aa11.44□□□□□ -0.58
LINC01493-202ENST00000533575 RSF1Q96T23 1441 aaPredicted RBP11.4□□□□□ -0.58
LINC01493-202ENST00000533575 SPDYE2BA6NHP3 402 aa11.39□□□□□ -0.59
LINC01493-202ENST00000533575 SPDYE6P0CI01 402 aa11.39□□□□□ -0.59
LINC01493-202ENST00000533575 SPDYE2Q495Y8 402 aa11.39□□□□□ -0.59
LINC01493-202ENST00000533575 AKT1S1Q96B36 256 aa11.39□□□□□ -0.59
LINC01493-202ENST00000533575 EIF4G1Q04637 1599 aaKnown RBP11.37□□□□□ -0.59
LINC01493-202ENST00000533575 SCRIBQ14160 1630 aa11.35□□□□□ -0.59
LINC01493-202ENST00000533575 REM2Q8IYK8 340 aaPredicted RBP11.32□□□□□ -0.6
LINC01493-202ENST00000533575 ZNF692Q9BU19 519 aaPredicted RBP11.32□□□□□ -0.6
LINC01493-202ENST00000533575 SSUH2Q9Y2M2 353 aa11.3□□□□□ -0.6
LINC01493-202ENST00000533575 BAZ1AQ9NRL2 1556 aaPredicted RBP11.28□□□□□ -0.6
LINC01493-202ENST00000533575 POTEHQ6S545 545 aa11.28□□□□□ -0.6
LINC01493-202ENST00000533575 DCAF8L2P0C7V8 631 aa11.26□□□□□ -0.61
LINC01493-202ENST00000533575 ACIN1Q9UKV3 1341 aaKnown RBP11.24□□□□□ -0.61
LINC01493-202ENST00000533575 TRIM41Q8WV44 630 aa11.23□□□□□ -0.61
LINC01493-202ENST00000533575 WRNQ14191 1432 aaPredicted RBP eCLIP11.22□□□□□ -0.61
LINC01493-202ENST00000533575 CHRDL2Q6WN34 429 aa11.22□□□□□ -0.61
LINC01493-202ENST00000533575 NACADO15069 1562 aa11.21□□□□□ -0.61
LINC01493-202ENST00000533575 PITPNM1O00562 1244 aa11.2□□□□□ -0.62
LINC01493-202ENST00000533575 SPDYE4A6NLX3 237 aa11.19□□□□□ -0.62
LINC01493-202ENST00000533575 CENPBP07199 599 aaPredicted RBP11.18□□□□□ -0.62
LINC01493-202ENST00000533575 PABPN1Q86U42 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
LINC01493-202ENST00000533575 WIZO95785 1651 aa11.17□□□□□ -0.62
LINC01493-202ENST00000533575 MROH2BQ7Z745 1585 aa11.13□□□□□ -0.63
LINC01493-202ENST00000533575 NEUROD1Q13562 356 aa11.1□□□□□ -0.63
LINC01493-202ENST00000533575 SPDYE1Q8NFV5 336 aaPredicted RBP11.1□□□□□ -0.63
LINC01493-202ENST00000533575 CLEC11AQ9Y240 323 aa11.1□□□□□ -0.63
LINC01493-202ENST00000533575 TOP2AP11388 1531 aaKnown RBP11.09□□□□□ -0.63
LINC01493-202ENST00000533575 EEA1Q15075 1411 aa11.07□□□□□ -0.64
LINC01493-202ENST00000533575 PIP4P2Q8N4L2 257 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms