Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CAPN6Q9Y6Q1 MCRIP2P1-201ENST00000394346 511 ntBASIC20.92■□□□□ 0.94
CAPN6Q9Y6Q1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.92■□□□□ 0.94
CAPN6Q9Y6Q1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CAPN6Q9Y6Q1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CAPN6Q9Y6Q1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CAPN6Q9Y6Q1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CAPN6Q9Y6Q1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CAPN6Q9Y6Q1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN6Q9Y6Q1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN6Q9Y6Q1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN6Q9Y6Q1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CAPN6Q9Y6Q1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN6Q9Y6Q1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN6Q9Y6Q1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN6Q9Y6Q1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN6Q9Y6Q1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
CAPN6Q9Y6Q1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN6Q9Y6Q1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.91■□□□□ 0.94
CAPN6Q9Y6Q1 RARRES2P4-201ENST00000514074 484 ntBASIC20.91■□□□□ 0.94
CAPN6Q9Y6Q1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.91■□□□□ 0.94
CAPN6Q9Y6Q1 PHGDH-210ENST00000641115 1638 ntBASIC20.91■□□□□ 0.94
CAPN6Q9Y6Q1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN6Q9Y6Q1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN6Q9Y6Q1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CAPN6Q9Y6Q1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN6Q9Y6Q1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN6Q9Y6Q1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN6Q9Y6Q1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN6Q9Y6Q1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN6Q9Y6Q1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
CAPN6Q9Y6Q1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.9■□□□□ 0.94
CAPN6Q9Y6Q1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN6Q9Y6Q1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN6Q9Y6Q1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN6Q9Y6Q1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.9■□□□□ 0.94
CAPN6Q9Y6Q1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.9■□□□□ 0.94
CAPN6Q9Y6Q1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.9■□□□□ 0.94
CAPN6Q9Y6Q1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.9■□□□□ 0.94
CAPN6Q9Y6Q1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN6Q9Y6Q1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.9■□□□□ 0.94
CAPN6Q9Y6Q1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN6Q9Y6Q1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CAPN6Q9Y6Q1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN6Q9Y6Q1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
CAPN6Q9Y6Q1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CAPN6Q9Y6Q1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CAPN6Q9Y6Q1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.89■□□□□ 0.93
CAPN6Q9Y6Q1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.89■□□□□ 0.93
CAPN6Q9Y6Q1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CAPN6Q9Y6Q1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.89■□□□□ 0.93
CAPN6Q9Y6Q1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CAPN6Q9Y6Q1 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.89■□□□□ 0.93
CAPN6Q9Y6Q1 AC100791.3-201ENST00000617619 330 ntBASIC20.89■□□□□ 0.93
CAPN6Q9Y6Q1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CAPN6Q9Y6Q1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CAPN6Q9Y6Q1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CAPN6Q9Y6Q1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CAPN6Q9Y6Q1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CAPN6Q9Y6Q1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CAPN6Q9Y6Q1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CAPN6Q9Y6Q1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CAPN6Q9Y6Q1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CAPN6Q9Y6Q1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.89■□□□□ 0.93
CAPN6Q9Y6Q1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 NTF6G-201ENST00000591094 616 ntBASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN6Q9Y6Q1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.87■□□□□ 0.93
CAPN6Q9Y6Q1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.87■□□□□ 0.93
CAPN6Q9Y6Q1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN6Q9Y6Q1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CAPN6Q9Y6Q1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN6Q9Y6Q1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.87■□□□□ 0.93
CAPN6Q9Y6Q1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN6Q9Y6Q1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN6Q9Y6Q1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN6Q9Y6Q1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN6Q9Y6Q1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN6Q9Y6Q1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms