Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSX2IPQ9Y2D8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSX2IPQ9Y2D8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SSX2IPQ9Y2D8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.23■□□□□ 0.99
SSX2IPQ9Y2D8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.23■□□□□ 0.99
SSX2IPQ9Y2D8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
SSX2IPQ9Y2D8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSX2IPQ9Y2D8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSX2IPQ9Y2D8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.23■□□□□ 0.99
SSX2IPQ9Y2D8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSX2IPQ9Y2D8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SSX2IPQ9Y2D8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
SSX2IPQ9Y2D8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.23■□□□□ 0.99
SSX2IPQ9Y2D8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SSX2IPQ9Y2D8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSX2IPQ9Y2D8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.23■□□□□ 0.99
SSX2IPQ9Y2D8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SSX2IPQ9Y2D8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.23■□□□□ 0.99
SSX2IPQ9Y2D8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSX2IPQ9Y2D8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 NUDT16P1-203ENST00000513809 620 ntBASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 PTBP1P-201ENST00000554374 1601 ntBASIC21.22■□□□□ 0.99
SSX2IPQ9Y2D8 AC005229.4-201ENST00000610085 2198 ntBASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSX2IPQ9Y2D8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SSX2IPQ9Y2D8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 UNC93B2-201ENST00000285383 730 ntBASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 KRT8P17-201ENST00000453110 1448 ntBASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SSX2IPQ9Y2D8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSX2IPQ9Y2D8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms