Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF6Q9Y252 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF6Q9Y252 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF6Q9Y252 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF6Q9Y252 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF6Q9Y252 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF6Q9Y252 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF6Q9Y252 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF6Q9Y252 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF6Q9Y252 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RNF6Q9Y252 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
RNF6Q9Y252 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.55■□□□□ 0.56
RNF6Q9Y252 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF6Q9Y252 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF6Q9Y252 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF6Q9Y252 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF6Q9Y252 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF6Q9Y252 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF6Q9Y252 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RNF6Q9Y252 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF6Q9Y252 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF6Q9Y252 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF6Q9Y252 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF6Q9Y252 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF6Q9Y252 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF6Q9Y252 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF6Q9Y252 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF6Q9Y252 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF6Q9Y252 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF6Q9Y252 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF6Q9Y252 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF6Q9Y252 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RNF6Q9Y252 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF6Q9Y252 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RNF6Q9Y252 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF6Q9Y252 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.54■□□□□ 0.56
RNF6Q9Y252 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RNF6Q9Y252 AC098590.1-201ENST00000468126 897 ntBASIC18.54■□□□□ 0.56
RNF6Q9Y252 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF6Q9Y252 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF6Q9Y252 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RNF6Q9Y252 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF6Q9Y252 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
RNF6Q9Y252 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF6Q9Y252 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF6Q9Y252 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF6Q9Y252 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
RNF6Q9Y252 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF6Q9Y252 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF6Q9Y252 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF6Q9Y252 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF6Q9Y252 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RNF6Q9Y252 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF6Q9Y252 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF6Q9Y252 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF6Q9Y252 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF6Q9Y252 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF6Q9Y252 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RNF6Q9Y252 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RNF6Q9Y252 LSM12P1-201ENST00000411836 588 ntBASIC18.53■□□□□ 0.56
RNF6Q9Y252 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF6Q9Y252 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF6Q9Y252 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RNF6Q9Y252 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF6Q9Y252 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF6Q9Y252 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF6Q9Y252 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF6Q9Y252 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF6Q9Y252 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF6Q9Y252 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF6Q9Y252 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF6Q9Y252 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF6Q9Y252 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF6Q9Y252 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RNF6Q9Y252 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF6Q9Y252 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF6Q9Y252 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF6Q9Y252 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF6Q9Y252 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF6Q9Y252 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF6Q9Y252 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF6Q9Y252 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF6Q9Y252 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF6Q9Y252 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
RNF6Q9Y252 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF6Q9Y252 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.52■□□□□ 0.56
RNF6Q9Y252 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF6Q9Y252 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF6Q9Y252 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF6Q9Y252 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF6Q9Y252 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF6Q9Y252 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.52■□□□□ 0.56
RNF6Q9Y252 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF6Q9Y252 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF6Q9Y252 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF6Q9Y252 AC006058.3-201ENST00000606217 1069 ntBASIC18.52■□□□□ 0.56
RNF6Q9Y252 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF6Q9Y252 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF6Q9Y252 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF6Q9Y252 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms