Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.58■□□□□ 0.4
COPS3Q9UNS2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
COPS3Q9UNS2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COPS3Q9UNS2 Z82202.1-201ENST00000623446 1880 ntBASIC17.58■□□□□ 0.4
COPS3Q9UNS2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.58■□□□□ 0.4
COPS3Q9UNS2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COPS3Q9UNS2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.58■□□□□ 0.4
COPS3Q9UNS2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPS3Q9UNS2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPS3Q9UNS2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COPS3Q9UNS2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 MCRIP2P1-201ENST00000394346 511 ntBASIC17.57■□□□□ 0.4
COPS3Q9UNS2 AC034268.1-201ENST00000441047 882 ntBASIC17.57■□□□□ 0.4
COPS3Q9UNS2 RARRES2P4-201ENST00000514074 484 ntBASIC17.57■□□□□ 0.4
COPS3Q9UNS2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPS3Q9UNS2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.56■□□□□ 0.4
COPS3Q9UNS2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 MFSD11-216ENST00000590393 1141 ntBASIC17.56■□□□□ 0.4
COPS3Q9UNS2 AC105020.6-201ENST00000621523 1217 ntBASIC17.56■□□□□ 0.4
COPS3Q9UNS2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPS3Q9UNS2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 KRT16P6-202ENST00000425692 1426 ntBASIC17.55■□□□□ 0.4
COPS3Q9UNS2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 CNN2P6-201ENST00000439038 900 ntBASIC17.55■□□□□ 0.4
COPS3Q9UNS2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPS3Q9UNS2 KRT8P20-201ENST00000423953 1409 ntBASIC17.55■□□□□ 0.4
COPS3Q9UNS2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms