Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CYSTM1Q9H1C7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 AC108860.2-201ENST00000562760 2183 ntBASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
CYSTM1Q9H1C7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 CA15P2-201ENST00000611168 834 ntBASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CYSTM1Q9H1C7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms