Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 AC142086.2-201ENST00000569753 217 ntBASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 AC060766.5-201ENST00000590539 871 ntBASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 AC083880.1-201ENST00000608266 535 ntBASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 AL158211.5-201ENST00000623583 2518 ntBASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MS4A4EQ96PG1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 TREX1-205ENST00000625293 1783 ntBASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 AC018553.1-201ENST00000616682 1458 ntBASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MS4A4EQ96PG1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
MS4A4EQ96PG1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 PNMA6B-201ENST00000538162 1200 ntBASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 AC006557.6-201ENST00000623071 864 ntBASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MS4A4EQ96PG1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms