Protein–RNA interactions for Protein: Q96KF2

PRAC1, Small nuclear protein PRAC1, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1Q96KF2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PRAC1Q96KF2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PRAC1Q96KF2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PRAC1Q96KF2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
PRAC1Q96KF2 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
PRAC1Q96KF2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC9.68□□□□□ -0.86
PRAC1Q96KF2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
PRAC1Q96KF2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PRAC1Q96KF2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PRAC1Q96KF2 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
PRAC1Q96KF2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC9.68□□□□□ -0.86
PRAC1Q96KF2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC9.68□□□□□ -0.86
PRAC1Q96KF2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PRAC1Q96KF2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
PRAC1Q96KF2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PRAC1Q96KF2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
PRAC1Q96KF2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PRAC1Q96KF2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 AC080080.1-201ENST00000625121 2420 ntBASIC9.67□□□□□ -0.86
PRAC1Q96KF2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 AL122018.1-201ENST00000446607 2310 ntBASIC9.67□□□□□ -0.86
PRAC1Q96KF2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
PRAC1Q96KF2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 AC005332.7-201ENST00000614046 2005 ntBASIC9.66□□□□□ -0.86
PRAC1Q96KF2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PRAC1Q96KF2 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PRAC1Q96KF2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms