Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
AP3S1Q92572 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S1Q92572 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S1Q92572 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.41■□□□□ 0.38
AP3S1Q92572 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.41■□□□□ 0.38
AP3S1Q92572 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S1Q92572 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S1Q92572 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S1Q92572 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S1Q92572 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S1Q92572 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.41■□□□□ 0.38
AP3S1Q92572 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S1Q92572 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S1Q92572 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.41■□□□□ 0.38
AP3S1Q92572 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S1Q92572 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S1Q92572 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.4■□□□□ 0.38
AP3S1Q92572 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
AP3S1Q92572 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
AP3S1Q92572 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.4■□□□□ 0.38
AP3S1Q92572 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S1Q92572 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S1Q92572 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
AP3S1Q92572 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S1Q92572 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S1Q92572 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
AP3S1Q92572 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S1Q92572 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.4■□□□□ 0.38
AP3S1Q92572 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
AP3S1Q92572 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
AP3S1Q92572 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S1Q92572 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S1Q92572 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S1Q92572 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
AP3S1Q92572 UNC93B8-201ENST00000511903 705 ntBASIC17.4■□□□□ 0.38
AP3S1Q92572 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.4■□□□□ 0.38
AP3S1Q92572 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.4■□□□□ 0.38
AP3S1Q92572 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
AP3S1Q92572 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
AP3S1Q92572 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S1Q92572 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S1Q92572 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
AP3S1Q92572 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
AP3S1Q92572 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S1Q92572 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S1Q92572 AC135050.7-201ENST00000624508 2218 ntBASIC17.4■□□□□ 0.38
AP3S1Q92572 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S1Q92572 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
AP3S1Q92572 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
AP3S1Q92572 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.39■□□□□ 0.37
AP3S1Q92572 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
AP3S1Q92572 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3S1Q92572 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP3S1Q92572 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3S1Q92572 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
AP3S1Q92572 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3S1Q92572 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP3S1Q92572 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.39■□□□□ 0.37
AP3S1Q92572 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.39■□□□□ 0.37
AP3S1Q92572 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP3S1Q92572 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.39■□□□□ 0.37
AP3S1Q92572 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.39■□□□□ 0.37
AP3S1Q92572 AC133561.4-201ENST00000566112 224 ntBASIC17.39■□□□□ 0.37
AP3S1Q92572 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
AP3S1Q92572 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.39■□□□□ 0.37
AP3S1Q92572 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3S1Q92572 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3S1Q92572 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
AP3S1Q92572 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.39■□□□□ 0.37
AP3S1Q92572 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3S1Q92572 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP3S1Q92572 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S1Q92572 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S1Q92572 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
AP3S1Q92572 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S1Q92572 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
AP3S1Q92572 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S1Q92572 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S1Q92572 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S1Q92572 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
AP3S1Q92572 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S1Q92572 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.38■□□□□ 0.37
AP3S1Q92572 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.38■□□□□ 0.37
AP3S1Q92572 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S1Q92572 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S1Q92572 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.38■□□□□ 0.37
AP3S1Q92572 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S1Q92572 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S1Q92572 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.38■□□□□ 0.37
AP3S1Q92572 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
AP3S1Q92572 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.38■□□□□ 0.37
AP3S1Q92572 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S1Q92572 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.38■□□□□ 0.37
AP3S1Q92572 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
AP3S1Q92572 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.38■□□□□ 0.37
AP3S1Q92572 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S1Q92572 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.37■□□□□ 0.37
AP3S1Q92572 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
AP3S1Q92572 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.37■□□□□ 0.37
AP3S1Q92572 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms