Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TMC1Q8TDI8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TMC1Q8TDI8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
TMC1Q8TDI8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TMC1Q8TDI8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC27.52■■■□□ 2
TMC1Q8TDI8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TMC1Q8TDI8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC27.52■■■□□ 2
TMC1Q8TDI8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC27.52■■■□□ 2
TMC1Q8TDI8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC27.52■■■□□ 2
TMC1Q8TDI8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
TMC1Q8TDI8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TMC1Q8TDI8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC27.52■■■□□ 2
TMC1Q8TDI8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TMC1Q8TDI8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC27.51■■■□□ 2
TMC1Q8TDI8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
TMC1Q8TDI8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TMC1Q8TDI8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
TMC1Q8TDI8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TMC1Q8TDI8 SMG8-203ENST00000578922 2178 ntBASIC27.51■■□□□ 1.99
TMC1Q8TDI8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
TMC1Q8TDI8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
TMC1Q8TDI8 GXYLT1P3-201ENST00000453058 1193 ntBASIC27.51■■□□□ 1.99
TMC1Q8TDI8 KRT16P5-201ENST00000455284 522 ntBASIC27.51■■□□□ 1.99
TMC1Q8TDI8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC27.51■■□□□ 1.99
TMC1Q8TDI8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
TMC1Q8TDI8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC27.51■■□□□ 1.99
TMC1Q8TDI8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC27.51■■□□□ 1.99
TMC1Q8TDI8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
TMC1Q8TDI8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC27.51■■□□□ 1.99
TMC1Q8TDI8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TMC1Q8TDI8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC27.51■■□□□ 1.99
TMC1Q8TDI8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TMC1Q8TDI8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC27.51■■□□□ 1.99
TMC1Q8TDI8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC27.5■■□□□ 1.99
TMC1Q8TDI8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TMC1Q8TDI8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC27.5■■□□□ 1.99
TMC1Q8TDI8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC27.5■■□□□ 1.99
TMC1Q8TDI8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC27.5■■□□□ 1.99
TMC1Q8TDI8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TMC1Q8TDI8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TMC1Q8TDI8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TMC1Q8TDI8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC27.5■■□□□ 1.99
TMC1Q8TDI8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
TMC1Q8TDI8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
TMC1Q8TDI8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC27.5■■□□□ 1.99
TMC1Q8TDI8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC27.5■■□□□ 1.99
TMC1Q8TDI8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC27.5■■□□□ 1.99
TMC1Q8TDI8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TMC1Q8TDI8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TMC1Q8TDI8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC27.5■■□□□ 1.99
TMC1Q8TDI8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TMC1Q8TDI8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
TMC1Q8TDI8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 TSPY15P-201ENST00000457163 923 ntBASIC27.49■■□□□ 1.99
TMC1Q8TDI8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 PENK-204ENST00000518770 863 ntTSL 2 BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
TMC1Q8TDI8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TMC1Q8TDI8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TMC1Q8TDI8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC27.48■■□□□ 1.99
TMC1Q8TDI8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TMC1Q8TDI8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TMC1Q8TDI8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TMC1Q8TDI8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
TMC1Q8TDI8 SAPCD2P4-201ENST00000424595 1171 ntBASIC27.48■■□□□ 1.99
TMC1Q8TDI8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC27.48■■□□□ 1.99
TMC1Q8TDI8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
TMC1Q8TDI8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TMC1Q8TDI8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TMC1Q8TDI8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
TMC1Q8TDI8 AL162377.1-201ENST00000618844 1793 ntBASIC27.48■■□□□ 1.99
TMC1Q8TDI8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
TMC1Q8TDI8 KRT17P2-201ENST00000300992 1314 ntBASIC27.47■■□□□ 1.99
TMC1Q8TDI8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TMC1Q8TDI8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
TMC1Q8TDI8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TMC1Q8TDI8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TMC1Q8TDI8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
TMC1Q8TDI8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TMC1Q8TDI8 AF186192.3-201ENST00000583427 947 ntBASIC27.47■■□□□ 1.99
TMC1Q8TDI8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC27.47■■□□□ 1.99
TMC1Q8TDI8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
TMC1Q8TDI8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms