Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSD4Q8NDX1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PSD4Q8NDX1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSD4Q8NDX1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.59■□□□□ 0.57
PSD4Q8NDX1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PSD4Q8NDX1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PSD4Q8NDX1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.59■□□□□ 0.57
PSD4Q8NDX1 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.59■□□□□ 0.57
PSD4Q8NDX1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.59■□□□□ 0.57
PSD4Q8NDX1 MIR2861-201ENST00000636310 90 ntBASIC18.59■□□□□ 0.57
PSD4Q8NDX1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSD4Q8NDX1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSD4Q8NDX1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PSD4Q8NDX1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.59■□□□□ 0.57
PSD4Q8NDX1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PSD4Q8NDX1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
PSD4Q8NDX1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSD4Q8NDX1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PSD4Q8NDX1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PSD4Q8NDX1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PSD4Q8NDX1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.58■□□□□ 0.57
PSD4Q8NDX1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PSD4Q8NDX1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PSD4Q8NDX1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PSD4Q8NDX1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PSD4Q8NDX1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PSD4Q8NDX1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.58■□□□□ 0.56
PSD4Q8NDX1 AC128676.1-201ENST00000454392 318 ntBASIC18.58■□□□□ 0.56
PSD4Q8NDX1 UNC93B4-201ENST00000505679 747 ntBASIC18.58■□□□□ 0.56
PSD4Q8NDX1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PSD4Q8NDX1 SOX15-203ENST00000570788 1093 ntBASIC18.58■□□□□ 0.56
PSD4Q8NDX1 AC008687.6-201ENST00000596318 630 ntBASIC18.58■□□□□ 0.56
PSD4Q8NDX1 AC008403.3-201ENST00000598924 454 ntBASIC18.58■□□□□ 0.56
PSD4Q8NDX1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PSD4Q8NDX1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PSD4Q8NDX1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PSD4Q8NDX1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PSD4Q8NDX1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PSD4Q8NDX1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PSD4Q8NDX1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PSD4Q8NDX1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PSD4Q8NDX1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.58■□□□□ 0.56
PSD4Q8NDX1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PSD4Q8NDX1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PSD4Q8NDX1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.57■□□□□ 0.56
PSD4Q8NDX1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.57■□□□□ 0.56
PSD4Q8NDX1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 KRT8P36-201ENST00000489121 1440 ntBASIC18.56■□□□□ 0.56
PSD4Q8NDX1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.56■□□□□ 0.56
PSD4Q8NDX1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PSD4Q8NDX1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.55■□□□□ 0.56
PSD4Q8NDX1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PSD4Q8NDX1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms