Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC9CQ8N5M4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.62■□□□□ 0.09
TTC9CQ8N5M4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TTC9CQ8N5M4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC9CQ8N5M4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC9CQ8N5M4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 AC104771.1-201ENST00000603335 964 ntBASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC9CQ8N5M4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 AC142086.2-201ENST00000569753 217 ntBASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 HLA-B-256ENST00000639848 1089 ntBASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TTC9CQ8N5M4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 AC069152.1-201ENST00000438030 544 ntBASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TTC9CQ8N5M4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TTC9CQ8N5M4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.58■□□□□ 0.09
TTC9CQ8N5M4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TTC9CQ8N5M4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TTC9CQ8N5M4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.58■□□□□ 0.09
TTC9CQ8N5M4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.09
TTC9CQ8N5M4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.58■□□□□ 0.09
TTC9CQ8N5M4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.58■□□□□ 0.09
TTC9CQ8N5M4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.58■□□□□ 0.08
TTC9CQ8N5M4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TTC9CQ8N5M4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TTC9CQ8N5M4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TTC9CQ8N5M4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.58■□□□□ 0.08
TTC9CQ8N5M4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TTC9CQ8N5M4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TTC9CQ8N5M4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms