Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2BBQ8N257 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST3H2BBQ8N257 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2BBQ8N257 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2BBQ8N257 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.8□□□□□ -0.04
HIST3H2BBQ8N257 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST3H2BBQ8N257 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST3H2BBQ8N257 AC073592.3-201ENST00000625118 1834 ntBASIC14.8□□□□□ -0.04
HIST3H2BBQ8N257 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2BBQ8N257 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2BBQ8N257 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HIST3H2BBQ8N257 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2BBQ8N257 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST3H2BBQ8N257 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST3H2BBQ8N257 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 HES6-205ENST00000409356 528 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 AC126763.1-201ENST00000552015 2118 ntBASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST3H2BBQ8N257 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIST3H2BBQ8N257 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
HIST3H2BBQ8N257 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST3H2BBQ8N257 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST3H2BBQ8N257 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC14.77□□□□□ -0.04
HIST3H2BBQ8N257 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HIST3H2BBQ8N257 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
HIST3H2BBQ8N257 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST3H2BBQ8N257 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
HIST3H2BBQ8N257 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HIST3H2BBQ8N257 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HIST3H2BBQ8N257 AC011484.1-201ENST00000377652 1995 ntBASIC14.77□□□□□ -0.04
HIST3H2BBQ8N257 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIST3H2BBQ8N257 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HIST3H2BBQ8N257 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms