Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.51■□□□□ 0.71
APLFQ8IW19 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
APLFQ8IW19 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
APLFQ8IW19 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
APLFQ8IW19 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.51■□□□□ 0.71
APLFQ8IW19 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.51■□□□□ 0.71
APLFQ8IW19 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
APLFQ8IW19 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
APLFQ8IW19 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.51■□□□□ 0.71
APLFQ8IW19 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
APLFQ8IW19 AP006294.2-201ENST00000641667 209 ntBASIC19.51■□□□□ 0.71
APLFQ8IW19 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APLFQ8IW19 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APLFQ8IW19 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.51■□□□□ 0.71
APLFQ8IW19 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APLFQ8IW19 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APLFQ8IW19 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
APLFQ8IW19 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
APLFQ8IW19 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APLFQ8IW19 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
APLFQ8IW19 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.51■□□□□ 0.71
APLFQ8IW19 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.5■□□□□ 0.71
APLFQ8IW19 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
APLFQ8IW19 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
APLFQ8IW19 AC027702.1-201ENST00000563810 1770 ntBASIC19.5■□□□□ 0.71
APLFQ8IW19 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.5■□□□□ 0.71
APLFQ8IW19 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
APLFQ8IW19 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
APLFQ8IW19 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
APLFQ8IW19 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
APLFQ8IW19 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.5■□□□□ 0.71
APLFQ8IW19 DUSP5P2-201ENST00000426873 1033 ntBASIC19.5■□□□□ 0.71
APLFQ8IW19 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.5■□□□□ 0.71
APLFQ8IW19 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.5■□□□□ 0.71
APLFQ8IW19 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.5■□□□□ 0.71
APLFQ8IW19 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.5■□□□□ 0.71
APLFQ8IW19 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
APLFQ8IW19 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
APLFQ8IW19 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.5■□□□□ 0.71
APLFQ8IW19 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
APLFQ8IW19 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
APLFQ8IW19 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.5■□□□□ 0.71
APLFQ8IW19 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
APLFQ8IW19 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
APLFQ8IW19 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
APLFQ8IW19 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
APLFQ8IW19 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
APLFQ8IW19 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
APLFQ8IW19 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.49■□□□□ 0.71
APLFQ8IW19 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
APLFQ8IW19 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
APLFQ8IW19 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.49■□□□□ 0.71
APLFQ8IW19 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
APLFQ8IW19 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
APLFQ8IW19 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.49■□□□□ 0.71
APLFQ8IW19 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
APLFQ8IW19 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
APLFQ8IW19 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
APLFQ8IW19 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
APLFQ8IW19 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
APLFQ8IW19 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.49■□□□□ 0.71
APLFQ8IW19 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
APLFQ8IW19 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
APLFQ8IW19 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
APLFQ8IW19 AC098590.1-201ENST00000468126 897 ntBASIC19.49■□□□□ 0.71
APLFQ8IW19 RPS2P52-201ENST00000469610 820 ntBASIC19.49■□□□□ 0.71
APLFQ8IW19 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.49■□□□□ 0.71
APLFQ8IW19 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.49■□□□□ 0.71
APLFQ8IW19 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
APLFQ8IW19 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.49■□□□□ 0.71
APLFQ8IW19 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
APLFQ8IW19 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
APLFQ8IW19 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
APLFQ8IW19 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
APLFQ8IW19 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.48■□□□□ 0.71
APLFQ8IW19 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
APLFQ8IW19 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
APLFQ8IW19 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.48■□□□□ 0.71
APLFQ8IW19 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.48■□□□□ 0.71
APLFQ8IW19 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
APLFQ8IW19 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
APLFQ8IW19 GCSHP5-201ENST00000443090 522 ntBASIC19.48■□□□□ 0.71
APLFQ8IW19 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
APLFQ8IW19 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
APLFQ8IW19 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.48■□□□□ 0.71
APLFQ8IW19 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
APLFQ8IW19 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
APLFQ8IW19 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
APLFQ8IW19 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.48■□□□□ 0.71
APLFQ8IW19 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
APLFQ8IW19 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.47■□□□□ 0.71
APLFQ8IW19 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
APLFQ8IW19 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.47■□□□□ 0.71
APLFQ8IW19 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
APLFQ8IW19 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
APLFQ8IW19 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APLFQ8IW19 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
APLFQ8IW19 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
APLFQ8IW19 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APLFQ8IW19 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms