Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LCA10Q71F78 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC10.64□□□□□ -0.71
LCA10Q71F78 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LCA10Q71F78 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LCA10Q71F78 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC10.64□□□□□ -0.71
LCA10Q71F78 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LCA10Q71F78 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LCA10Q71F78 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LCA10Q71F78 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LCA10Q71F78 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LCA10Q71F78 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LCA10Q71F78 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LCA10Q71F78 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC10.64□□□□□ -0.71
LCA10Q71F78 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC10.63□□□□□ -0.71
LCA10Q71F78 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC10.63□□□□□ -0.71
LCA10Q71F78 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC10.63□□□□□ -0.71
LCA10Q71F78 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
LCA10Q71F78 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 CROCCP1-201ENST00000426910 5675 ntBASIC10.63□□□□□ -0.71
LCA10Q71F78 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
LCA10Q71F78 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
LCA10Q71F78 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC10.63□□□□□ -0.71
LCA10Q71F78 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC10.63□□□□□ -0.71
LCA10Q71F78 AL117332.1-201ENST00000622628 974 ntBASIC10.63□□□□□ -0.71
LCA10Q71F78 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
LCA10Q71F78 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC10.63□□□□□ -0.71
LCA10Q71F78 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 AC018695.7-201ENST00000624587 2492 ntBASIC10.63□□□□□ -0.71
LCA10Q71F78 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
LCA10Q71F78 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LCA10Q71F78 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
LCA10Q71F78 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC10.63□□□□□ -0.71
LCA10Q71F78 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC10.62□□□□□ -0.71
LCA10Q71F78 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 ME2-216ENST00000639850 2331 ntTSL 5 BASIC10.62□□□□□ -0.71
LCA10Q71F78 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC10.62□□□□□ -0.71
LCA10Q71F78 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
LCA10Q71F78 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 LSM4-201ENST00000252816 986 ntTSL 2 BASIC10.62□□□□□ -0.71
LCA10Q71F78 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC10.62□□□□□ -0.71
LCA10Q71F78 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC10.62□□□□□ -0.71
LCA10Q71F78 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC10.62□□□□□ -0.71
LCA10Q71F78 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC10.62□□□□□ -0.71
LCA10Q71F78 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC10.62□□□□□ -0.71
LCA10Q71F78 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LCA10Q71F78 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms