Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf88Q6PI97 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 KRT19P1-201ENST00000405746 1186 ntBASIC17.16■□□□□ 0.34
C11orf88Q6PI97 AC016769.1-201ENST00000409132 1010 ntBASIC17.16■□□□□ 0.34
C11orf88Q6PI97 AC004911.1-201ENST00000416316 871 ntBASIC17.16■□□□□ 0.34
C11orf88Q6PI97 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 NFIC-211ENST00000641145 8399 ntBASIC17.16■□□□□ 0.34
C11orf88Q6PI97 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf88Q6PI97 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf88Q6PI97 LETM1P2-201ENST00000597330 2178 ntBASIC17.15■□□□□ 0.34
C11orf88Q6PI97 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf88Q6PI97 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf88Q6PI97 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf88Q6PI97 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
C11orf88Q6PI97 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf88Q6PI97 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf88Q6PI97 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf88Q6PI97 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.15■□□□□ 0.34
C11orf88Q6PI97 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.15■□□□□ 0.34
C11orf88Q6PI97 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf88Q6PI97 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
C11orf88Q6PI97 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
C11orf88Q6PI97 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
C11orf88Q6PI97 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.15■□□□□ 0.34
C11orf88Q6PI97 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf88Q6PI97 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf88Q6PI97 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
C11orf88Q6PI97 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
C11orf88Q6PI97 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
C11orf88Q6PI97 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 KRT18P11-201ENST00000435214 1283 ntBASIC17.14■□□□□ 0.33
C11orf88Q6PI97 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
C11orf88Q6PI97 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.13■□□□□ 0.33
C11orf88Q6PI97 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms