Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CBX1P83916 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.71■□□□□ 0.91
CBX1P83916 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CBX1P83916 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CBX1P83916 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CBX1P83916 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.7■□□□□ 0.91
CBX1P83916 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.7■□□□□ 0.91
CBX1P83916 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.7■□□□□ 0.9
CBX1P83916 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CBX1P83916 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CBX1P83916 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CBX1P83916 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CBX1P83916 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CBX1P83916 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.7■□□□□ 0.9
CBX1P83916 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CBX1P83916 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CBX1P83916 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CBX1P83916 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CBX1P83916 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CBX1P83916 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.7■□□□□ 0.9
CBX1P83916 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CBX1P83916 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CBX1P83916 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CBX1P83916 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CBX1P83916 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CBX1P83916 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.7■□□□□ 0.9
CBX1P83916 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CBX1P83916 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.7■□□□□ 0.9
CBX1P83916 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CBX1P83916 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CBX1P83916 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CBX1P83916 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CBX1P83916 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CBX1P83916 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.69■□□□□ 0.9
CBX1P83916 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CBX1P83916 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CBX1P83916 LONRF2P2-201ENST00000439212 571 ntBASIC20.69■□□□□ 0.9
CBX1P83916 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
CBX1P83916 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.69■□□□□ 0.9
CBX1P83916 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.69■□□□□ 0.9
CBX1P83916 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CBX1P83916 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CBX1P83916 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CBX1P83916 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CBX1P83916 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CBX1P83916 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CBX1P83916 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CBX1P83916 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX1P83916 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.68■□□□□ 0.9
CBX1P83916 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX1P83916 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX1P83916 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX1P83916 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX1P83916 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.68■□□□□ 0.9
CBX1P83916 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX1P83916 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CBX1P83916 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CBX1P83916 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.68■□□□□ 0.9
CBX1P83916 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX1P83916 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CBX1P83916 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CBX1P83916 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CBX1P83916 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX1P83916 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX1P83916 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX1P83916 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CBX1P83916 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CBX1P83916 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.68■□□□□ 0.9
CBX1P83916 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.68■□□□□ 0.9
CBX1P83916 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CBX1P83916 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
CBX1P83916 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.67■□□□□ 0.9
CBX1P83916 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.67■□□□□ 0.9
CBX1P83916 MIR6765-201ENST00000614092 87 ntBASIC20.67■□□□□ 0.9
CBX1P83916 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CBX1P83916 MKRN4P-201ENST00000444706 1521 ntBASIC20.67■□□□□ 0.9
CBX1P83916 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.67■□□□□ 0.9
CBX1P83916 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX1P83916 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX1P83916 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms