Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SEC61A1P61619 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEC61A1P61619 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SEC61A1P61619 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SEC61A1P61619 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SEC61A1P61619 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.23■□□□□ 0.35
SEC61A1P61619 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEC61A1P61619 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEC61A1P61619 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEC61A1P61619 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEC61A1P61619 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SEC61A1P61619 AL162412.1-201ENST00000567129 965 ntBASIC17.23■□□□□ 0.35
SEC61A1P61619 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.23■□□□□ 0.35
SEC61A1P61619 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SEC61A1P61619 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEC61A1P61619 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEC61A1P61619 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.23■□□□□ 0.35
SEC61A1P61619 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEC61A1P61619 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SEC61A1P61619 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SEC61A1P61619 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEC61A1P61619 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SEC61A1P61619 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SEC61A1P61619 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.23■□□□□ 0.35
SEC61A1P61619 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEC61A1P61619 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEC61A1P61619 NEFHP1-201ENST00000412845 2629 ntBASIC17.22■□□□□ 0.35
SEC61A1P61619 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SEC61A1P61619 AC005082.1-201ENST00000413042 2259 ntBASIC17.22■□□□□ 0.35
SEC61A1P61619 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEC61A1P61619 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.22■□□□□ 0.35
SEC61A1P61619 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SEC61A1P61619 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEC61A1P61619 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEC61A1P61619 AC069152.1-201ENST00000438030 544 ntBASIC17.22■□□□□ 0.35
SEC61A1P61619 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.22■□□□□ 0.35
SEC61A1P61619 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.22■□□□□ 0.35
SEC61A1P61619 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SEC61A1P61619 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SEC61A1P61619 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SEC61A1P61619 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SEC61A1P61619 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.22■□□□□ 0.35
SEC61A1P61619 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SEC61A1P61619 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.22■□□□□ 0.35
SEC61A1P61619 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEC61A1P61619 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SEC61A1P61619 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEC61A1P61619 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SEC61A1P61619 AC010980.2-201ENST00000587099 1412 ntBASIC17.21■□□□□ 0.35
SEC61A1P61619 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
SEC61A1P61619 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.21■□□□□ 0.35
SEC61A1P61619 HCG11-201ENST00000411553 5696 ntBASIC17.21■□□□□ 0.35
SEC61A1P61619 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEC61A1P61619 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEC61A1P61619 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEC61A1P61619 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
SEC61A1P61619 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SEC61A1P61619 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEC61A1P61619 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SEC61A1P61619 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEC61A1P61619 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SEC61A1P61619 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SEC61A1P61619 AL512625.2-201ENST00000417533 625 ntBASIC17.21■□□□□ 0.35
SEC61A1P61619 BX276092.2-201ENST00000417668 665 ntBASIC17.21■□□□□ 0.35
SEC61A1P61619 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.21■□□□□ 0.35
SEC61A1P61619 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.21■□□□□ 0.35
SEC61A1P61619 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.21■□□□□ 0.35
SEC61A1P61619 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SEC61A1P61619 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.21■□□□□ 0.35
SEC61A1P61619 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.21■□□□□ 0.35
SEC61A1P61619 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SEC61A1P61619 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEC61A1P61619 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SEC61A1P61619 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.21■□□□□ 0.35
SEC61A1P61619 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SEC61A1P61619 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEC61A1P61619 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
SEC61A1P61619 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SEC61A1P61619 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SEC61A1P61619 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.2■□□□□ 0.34
SEC61A1P61619 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEC61A1P61619 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SEC61A1P61619 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SEC61A1P61619 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEC61A1P61619 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SEC61A1P61619 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.2■□□□□ 0.34
SEC61A1P61619 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEC61A1P61619 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SEC61A1P61619 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.2■□□□□ 0.34
SEC61A1P61619 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.2■□□□□ 0.34
SEC61A1P61619 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.2■□□□□ 0.34
SEC61A1P61619 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.2■□□□□ 0.34
SEC61A1P61619 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.2■□□□□ 0.34
SEC61A1P61619 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.2■□□□□ 0.34
SEC61A1P61619 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SEC61A1P61619 AC011484.1-201ENST00000377652 1995 ntBASIC17.2■□□□□ 0.34
SEC61A1P61619 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SEC61A1P61619 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEC61A1P61619 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEC61A1P61619 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms