Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH6P55285 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDH6P55285 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH6P55285 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH6P55285 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.55■□□□□ 0.88
CDH6P55285 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH6P55285 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CDH6P55285 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH6P55285 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDH6P55285 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDH6P55285 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH6P55285 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH6P55285 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.55■□□□□ 0.88
CDH6P55285 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.55■□□□□ 0.88
CDH6P55285 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.55■□□□□ 0.88
CDH6P55285 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH6P55285 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDH6P55285 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH6P55285 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH6P55285 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH6P55285 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
CDH6P55285 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CDH6P55285 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH6P55285 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CDH6P55285 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH6P55285 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CDH6P55285 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CDH6P55285 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CDH6P55285 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH6P55285 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH6P55285 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDH6P55285 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH6P55285 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.54■□□□□ 0.88
CDH6P55285 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH6P55285 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.54■□□□□ 0.88
CDH6P55285 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.54■□□□□ 0.88
CDH6P55285 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CDH6P55285 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.54■□□□□ 0.88
CDH6P55285 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH6P55285 TREX1-205ENST00000625293 1783 ntBASIC20.54■□□□□ 0.88
CDH6P55285 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
CDH6P55285 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDH6P55285 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH6P55285 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH6P55285 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.54■□□□□ 0.88
CDH6P55285 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.53■□□□□ 0.88
CDH6P55285 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.53■□□□□ 0.88
CDH6P55285 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH6P55285 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH6P55285 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.53■□□□□ 0.88
CDH6P55285 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH6P55285 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.53■□□□□ 0.88
CDH6P55285 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH6P55285 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH6P55285 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.53■□□□□ 0.88
CDH6P55285 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.53■□□□□ 0.88
CDH6P55285 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.53■□□□□ 0.88
CDH6P55285 AC006557.6-201ENST00000623071 864 ntBASIC20.53■□□□□ 0.88
CDH6P55285 AC133041.1-202ENST00000642053 222 ntBASIC20.53■□□□□ 0.88
CDH6P55285 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.53■□□□□ 0.88
CDH6P55285 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH6P55285 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CDH6P55285 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH6P55285 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH6P55285 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH6P55285 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.53■□□□□ 0.88
CDH6P55285 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH6P55285 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH6P55285 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
CDH6P55285 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.53■□□□□ 0.88
CDH6P55285 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH6P55285 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.53■□□□□ 0.88
CDH6P55285 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CDH6P55285 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH6P55285 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH6P55285 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDH6P55285 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH6P55285 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.52■□□□□ 0.88
CDH6P55285 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH6P55285 AC069152.1-201ENST00000438030 544 ntBASIC20.52■□□□□ 0.88
CDH6P55285 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.52■□□□□ 0.88
CDH6P55285 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.52■□□□□ 0.88
CDH6P55285 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDH6P55285 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.52■□□□□ 0.88
CDH6P55285 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.52■□□□□ 0.88
CDH6P55285 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH6P55285 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.52■□□□□ 0.88
CDH6P55285 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDH6P55285 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH6P55285 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH6P55285 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CDH6P55285 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CDH6P55285 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CDH6P55285 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CDH6P55285 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH6P55285 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.51■□□□□ 0.87
CDH6P55285 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.51■□□□□ 0.87
CDH6P55285 AIRN-201ENST00000601203 4374 ntBASIC20.51■□□□□ 0.87
CDH6P55285 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH6P55285 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms