Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
AIF1P55008 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.41■□□□□ 0.86
AIF1P55008 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AIF1P55008 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AIF1P55008 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.41■□□□□ 0.86
AIF1P55008 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.41■□□□□ 0.86
AIF1P55008 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.41■□□□□ 0.86
AIF1P55008 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.41■□□□□ 0.86
AIF1P55008 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AIF1P55008 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.41■□□□□ 0.86
AIF1P55008 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
AIF1P55008 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AIF1P55008 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
AIF1P55008 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AIF1P55008 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.41■□□□□ 0.86
AIF1P55008 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.41■□□□□ 0.86
AIF1P55008 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AIF1P55008 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AIF1P55008 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
AIF1P55008 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AIF1P55008 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AIF1P55008 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AIF1P55008 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AIF1P55008 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
AIF1P55008 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.4■□□□□ 0.86
AIF1P55008 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
AIF1P55008 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AIF1P55008 YBX1P10-201ENST00000444752 975 ntBASIC20.4■□□□□ 0.86
AIF1P55008 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.4■□□□□ 0.86
AIF1P55008 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.4■□□□□ 0.86
AIF1P55008 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.4■□□□□ 0.86
AIF1P55008 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.4■□□□□ 0.86
AIF1P55008 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
AIF1P55008 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AIF1P55008 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
AIF1P55008 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AIF1P55008 AC125437.2-201ENST00000625180 2167 ntBASIC20.39■□□□□ 0.86
AIF1P55008 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.39■□□□□ 0.86
AIF1P55008 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
AIF1P55008 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
AIF1P55008 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
AIF1P55008 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.39■□□□□ 0.86
AIF1P55008 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
AIF1P55008 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
AIF1P55008 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.39■□□□□ 0.86
AIF1P55008 AP006587.1-201ENST00000534129 1502 ntBASIC20.39■□□□□ 0.85
AIF1P55008 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AIF1P55008 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AIF1P55008 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AIF1P55008 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AIF1P55008 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AIF1P55008 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.39■□□□□ 0.85
AIF1P55008 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.39■□□□□ 0.85
AIF1P55008 PRKY-204ENST00000533551 1019 ntBASIC20.39■□□□□ 0.85
AIF1P55008 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.39■□□□□ 0.85
AIF1P55008 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
AIF1P55008 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
AIF1P55008 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.39■□□□□ 0.85
AIF1P55008 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.39■□□□□ 0.85
AIF1P55008 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
AIF1P55008 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.38■□□□□ 0.85
AIF1P55008 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
AIF1P55008 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
AIF1P55008 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.38■□□□□ 0.85
AIF1P55008 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
AIF1P55008 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
AIF1P55008 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
AIF1P55008 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
AIF1P55008 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
AIF1P55008 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
AIF1P55008 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AIF1P55008 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AIF1P55008 ESRRAP1-201ENST00000400596 1257 ntBASIC20.38■□□□□ 0.85
AIF1P55008 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.38■□□□□ 0.85
AIF1P55008 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
AIF1P55008 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
AIF1P55008 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
AIF1P55008 AC069544.1-201ENST00000609399 999 ntBASIC20.38■□□□□ 0.85
AIF1P55008 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.38■□□□□ 0.85
AIF1P55008 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.38■□□□□ 0.85
AIF1P55008 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AIF1P55008 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
AIF1P55008 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.37■□□□□ 0.85
AIF1P55008 PCDHAC2-203ENST00000615316 3011 ntBASIC20.37■□□□□ 0.85
AIF1P55008 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
AIF1P55008 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
AIF1P55008 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AIF1P55008 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AIF1P55008 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
AIF1P55008 TREX1-205ENST00000625293 1783 ntBASIC20.37■□□□□ 0.85
AIF1P55008 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
AIF1P55008 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
AIF1P55008 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
AIF1P55008 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
AIF1P55008 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.37■□□□□ 0.85
AIF1P55008 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
AIF1P55008 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AIF1P55008 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
AIF1P55008 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.37■□□□□ 0.85
AIF1P55008 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms