Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.74■■□□□ 1.07
PMS1P54277 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.74■■□□□ 1.07
PMS1P54277 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PMS1P54277 AC018553.1-201ENST00000616682 1458 ntBASIC21.74■■□□□ 1.07
PMS1P54277 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PMS1P54277 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PMS1P54277 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PMS1P54277 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.74■■□□□ 1.07
PMS1P54277 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PMS1P54277 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PMS1P54277 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PMS1P54277 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
PMS1P54277 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.74■■□□□ 1.07
PMS1P54277 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PMS1P54277 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PMS1P54277 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PMS1P54277 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PMS1P54277 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PMS1P54277 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.73■■□□□ 1.07
PMS1P54277 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PMS1P54277 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.73■■□□□ 1.07
PMS1P54277 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.73■■□□□ 1.07
PMS1P54277 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.73■■□□□ 1.07
PMS1P54277 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PMS1P54277 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.73■■□□□ 1.07
PMS1P54277 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PMS1P54277 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PMS1P54277 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.73■■□□□ 1.07
PMS1P54277 AC091874.3-201ENST00000512672 1195 ntBASIC21.73■■□□□ 1.07
PMS1P54277 AC092118.2-201ENST00000613495 667 ntBASIC21.73■■□□□ 1.07
PMS1P54277 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.73■■□□□ 1.07
PMS1P54277 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PMS1P54277 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PMS1P54277 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.73■■□□□ 1.07
PMS1P54277 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PMS1P54277 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PMS1P54277 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PMS1P54277 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PMS1P54277 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PMS1P54277 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PMS1P54277 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.72■■□□□ 1.07
PMS1P54277 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PMS1P54277 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.72■■□□□ 1.07
PMS1P54277 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PMS1P54277 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PMS1P54277 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.72■■□□□ 1.07
PMS1P54277 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PMS1P54277 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PMS1P54277 AC098934.4-201ENST00000564127 592 ntBASIC21.72■■□□□ 1.07
PMS1P54277 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.72■■□□□ 1.07
PMS1P54277 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PMS1P54277 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PMS1P54277 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.72■■□□□ 1.07
PMS1P54277 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PMS1P54277 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.72■■□□□ 1.07
PMS1P54277 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PMS1P54277 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PMS1P54277 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PMS1P54277 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PMS1P54277 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PMS1P54277 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.71■■□□□ 1.07
PMS1P54277 AC124283.5-201ENST00000624661 1809 ntBASIC21.71■■□□□ 1.07
PMS1P54277 AC116351.2-201ENST00000606540 1585 ntBASIC21.71■■□□□ 1.07
PMS1P54277 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.71■■□□□ 1.07
PMS1P54277 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PMS1P54277 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.71■■□□□ 1.07
PMS1P54277 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.71■■□□□ 1.07
PMS1P54277 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.71■■□□□ 1.07
PMS1P54277 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.71■■□□□ 1.07
PMS1P54277 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.71■■□□□ 1.07
PMS1P54277 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.71■■□□□ 1.07
PMS1P54277 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PMS1P54277 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.71■■□□□ 1.07
PMS1P54277 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PMS1P54277 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PMS1P54277 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PMS1P54277 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
PMS1P54277 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PMS1P54277 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PMS1P54277 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PMS1P54277 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PMS1P54277 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.71■■□□□ 1.07
PMS1P54277 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PMS1P54277 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PMS1P54277 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.71■■□□□ 1.07
PMS1P54277 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PMS1P54277 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PMS1P54277 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.7■■□□□ 1.07
PMS1P54277 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PMS1P54277 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PMS1P54277 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PMS1P54277 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PMS1P54277 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PMS1P54277 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.7■■□□□ 1.06
PMS1P54277 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PMS1P54277 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.7■■□□□ 1.06
PMS1P54277 AC005829.2-201ENST00000571422 1056 ntBASIC21.7■■□□□ 1.06
PMS1P54277 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PMS1P54277 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PMS1P54277 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms