Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
KRT20P35900 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT20P35900 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT20P35900 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.74■□□□□ 0.59
KRT20P35900 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT20P35900 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT20P35900 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
KRT20P35900 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT20P35900 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT20P35900 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
KRT20P35900 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT20P35900 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.74■□□□□ 0.59
KRT20P35900 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT20P35900 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT20P35900 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT20P35900 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.74■□□□□ 0.59
KRT20P35900 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT20P35900 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT20P35900 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT20P35900 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRT20P35900 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.74■□□□□ 0.59
KRT20P35900 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.74■□□□□ 0.59
KRT20P35900 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.74■□□□□ 0.59
KRT20P35900 MIR4758-201ENST00000577688 71 ntBASIC18.74■□□□□ 0.59
KRT20P35900 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.74■□□□□ 0.59
KRT20P35900 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.74■□□□□ 0.59
KRT20P35900 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRT20P35900 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
KRT20P35900 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
KRT20P35900 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRT20P35900 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.73■□□□□ 0.59
KRT20P35900 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT20P35900 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT20P35900 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT20P35900 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT20P35900 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT20P35900 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT20P35900 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT20P35900 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
KRT20P35900 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT20P35900 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRT20P35900 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT20P35900 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRT20P35900 MIPEPP3-201ENST00000412105 444 ntBASIC18.73■□□□□ 0.59
KRT20P35900 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT20P35900 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRT20P35900 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
KRT20P35900 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT20P35900 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT20P35900 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
KRT20P35900 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT20P35900 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT20P35900 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
KRT20P35900 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT20P35900 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT20P35900 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
KRT20P35900 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT20P35900 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT20P35900 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
KRT20P35900 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.72■□□□□ 0.59
KRT20P35900 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT20P35900 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT20P35900 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
KRT20P35900 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT20P35900 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.72■□□□□ 0.59
KRT20P35900 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
KRT20P35900 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
KRT20P35900 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT20P35900 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT20P35900 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
KRT20P35900 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT20P35900 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.72■□□□□ 0.59
KRT20P35900 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT20P35900 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
KRT20P35900 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT20P35900 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KRT20P35900 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT20P35900 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT20P35900 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT20P35900 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT20P35900 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.71■□□□□ 0.59
KRT20P35900 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
KRT20P35900 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT20P35900 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRT20P35900 KRT17P1-201ENST00000399211 1546 ntBASIC18.71■□□□□ 0.59
KRT20P35900 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRT20P35900 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRT20P35900 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT20P35900 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.71■□□□□ 0.59
KRT20P35900 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
KRT20P35900 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.71■□□□□ 0.59
KRT20P35900 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.71■□□□□ 0.59
KRT20P35900 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
KRT20P35900 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
KRT20P35900 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT20P35900 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRT20P35900 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.71■□□□□ 0.59
KRT20P35900 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
KRT20P35900 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
KRT20P35900 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms