Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
HOXC8P31273 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC8P31273 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.68■■□□□ 1.06
HOXC8P31273 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC8P31273 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.68■■□□□ 1.06
HOXC8P31273 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
HOXC8P31273 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.68■■□□□ 1.06
HOXC8P31273 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.68■■□□□ 1.06
HOXC8P31273 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC8P31273 AC010203.1-204ENST00000548782 407 ntBASIC21.68■■□□□ 1.06
HOXC8P31273 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.68■■□□□ 1.06
HOXC8P31273 C2orf69P3-201ENST00000565542 1120 ntBASIC21.68■■□□□ 1.06
HOXC8P31273 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC8P31273 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC8P31273 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC8P31273 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC8P31273 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC8P31273 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC8P31273 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.68■■□□□ 1.06
HOXC8P31273 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.68■■□□□ 1.06
HOXC8P31273 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC8P31273 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC8P31273 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC8P31273 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
HOXC8P31273 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC8P31273 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC8P31273 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.67■■□□□ 1.06
HOXC8P31273 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC8P31273 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC8P31273 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC8P31273 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.67■■□□□ 1.06
HOXC8P31273 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC8P31273 AC097488.1-201ENST00000507834 756 ntBASIC21.67■■□□□ 1.06
HOXC8P31273 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.67■■□□□ 1.06
HOXC8P31273 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.67■■□□□ 1.06
HOXC8P31273 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
HOXC8P31273 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.66■■□□□ 1.06
HOXC8P31273 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.66■■□□□ 1.06
HOXC8P31273 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HOXC8P31273 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HOXC8P31273 AC096733.2-201ENST00000609937 1394 ntBASIC21.66■■□□□ 1.06
HOXC8P31273 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HOXC8P31273 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HOXC8P31273 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.66■■□□□ 1.06
HOXC8P31273 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HOXC8P31273 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HOXC8P31273 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.66■■□□□ 1.06
HOXC8P31273 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.66■■□□□ 1.06
HOXC8P31273 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.66■■□□□ 1.06
HOXC8P31273 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.66■■□□□ 1.06
HOXC8P31273 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
HOXC8P31273 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.66■■□□□ 1.06
HOXC8P31273 FAM87A-204ENST00000613235 858 ntBASIC21.66■■□□□ 1.06
HOXC8P31273 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HOXC8P31273 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
HOXC8P31273 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
HOXC8P31273 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.66■■□□□ 1.06
HOXC8P31273 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
HOXC8P31273 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.66■■□□□ 1.06
HOXC8P31273 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.66■■□□□ 1.06
HOXC8P31273 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.65■■□□□ 1.06
HOXC8P31273 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HOXC8P31273 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.65■■□□□ 1.06
HOXC8P31273 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HOXC8P31273 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HOXC8P31273 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HOXC8P31273 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.65■■□□□ 1.06
HOXC8P31273 AC104076.2-201ENST00000448912 469 ntBASIC21.65■■□□□ 1.06
HOXC8P31273 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.65■■□□□ 1.06
HOXC8P31273 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
HOXC8P31273 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
HOXC8P31273 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.65■■□□□ 1.06
HOXC8P31273 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HOXC8P31273 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HOXC8P31273 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.65■■□□□ 1.06
HOXC8P31273 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HOXC8P31273 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
HOXC8P31273 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.64■■□□□ 1.06
HOXC8P31273 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
HOXC8P31273 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
HOXC8P31273 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.64■■□□□ 1.06
HOXC8P31273 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HOXC8P31273 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
HOXC8P31273 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.64■■□□□ 1.05
HOXC8P31273 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HOXC8P31273 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
HOXC8P31273 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.64■■□□□ 1.05
HOXC8P31273 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.64■■□□□ 1.05
HOXC8P31273 Z85996.1-201ENST00000494644 937 ntBASIC21.64■■□□□ 1.05
HOXC8P31273 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HOXC8P31273 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
HOXC8P31273 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.64■■□□□ 1.05
HOXC8P31273 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.64■■□□□ 1.05
HOXC8P31273 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.64■■□□□ 1.05
HOXC8P31273 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.64■■□□□ 1.05
HOXC8P31273 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HOXC8P31273 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HOXC8P31273 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.64■■□□□ 1.05
HOXC8P31273 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.63■■□□□ 1.05
HOXC8P31273 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms