Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNA3P22001 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC24.38■■□□□ 1.49
KCNA3P22001 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNA3P22001 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
KCNA3P22001 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.37■■□□□ 1.49
KCNA3P22001 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNA3P22001 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNA3P22001 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNA3P22001 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNA3P22001 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC24.37■■□□□ 1.49
KCNA3P22001 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC24.37■■□□□ 1.49
KCNA3P22001 FXN-203ENST00000396366 922 ntTSL 2 BASIC24.37■■□□□ 1.49
KCNA3P22001 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC24.37■■□□□ 1.49
KCNA3P22001 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC24.37■■□□□ 1.49
KCNA3P22001 GXYLT1P6-201ENST00000456472 1187 ntBASIC24.37■■□□□ 1.49
KCNA3P22001 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC24.37■■□□□ 1.49
KCNA3P22001 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC24.37■■□□□ 1.49
KCNA3P22001 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC24.37■■□□□ 1.49
KCNA3P22001 AL691432.3-201ENST00000621860 400 ntBASIC24.37■■□□□ 1.49
KCNA3P22001 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNA3P22001 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.37■■□□□ 1.49
KCNA3P22001 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNA3P22001 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
KCNA3P22001 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.37■■□□□ 1.49
KCNA3P22001 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
KCNA3P22001 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
KCNA3P22001 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC24.36■■□□□ 1.49
KCNA3P22001 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
KCNA3P22001 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC24.36■■□□□ 1.49
KCNA3P22001 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
KCNA3P22001 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
KCNA3P22001 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
KCNA3P22001 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
KCNA3P22001 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
KCNA3P22001 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
KCNA3P22001 PVRIG2P-201ENST00000435460 978 ntBASIC24.36■■□□□ 1.49
KCNA3P22001 AP000347.1-202ENST00000435868 847 ntBASIC24.36■■□□□ 1.49
KCNA3P22001 TSPY17P-201ENST00000450329 467 ntBASIC24.36■■□□□ 1.49
KCNA3P22001 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
KCNA3P22001 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC24.36■■□□□ 1.49
KCNA3P22001 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
KCNA3P22001 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC24.36■■□□□ 1.49
KCNA3P22001 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC24.36■■□□□ 1.49
KCNA3P22001 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC24.36■■□□□ 1.49
KCNA3P22001 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
KCNA3P22001 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
KCNA3P22001 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
KCNA3P22001 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC24.35■■□□□ 1.49
KCNA3P22001 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNA3P22001 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
KCNA3P22001 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
KCNA3P22001 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
KCNA3P22001 GOLGA6L3-201ENST00000507199 1679 ntBASIC24.35■■□□□ 1.49
KCNA3P22001 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
KCNA3P22001 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
KCNA3P22001 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
KCNA3P22001 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
KCNA3P22001 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
KCNA3P22001 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNA3P22001 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
KCNA3P22001 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
KCNA3P22001 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
KCNA3P22001 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
KCNA3P22001 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
KCNA3P22001 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
KCNA3P22001 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC24.34■■□□□ 1.49
KCNA3P22001 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC24.34■■□□□ 1.49
KCNA3P22001 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
KCNA3P22001 FDX1P1-201ENST00000449115 551 ntBASIC24.34■■□□□ 1.49
KCNA3P22001 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC24.34■■□□□ 1.49
KCNA3P22001 AC140113.3-201ENST00000605663 199 ntBASIC24.34■■□□□ 1.49
KCNA3P22001 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
KCNA3P22001 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
KCNA3P22001 AL121603.2-201ENST00000557373 2117 ntBASIC24.34■■□□□ 1.49
KCNA3P22001 CASK-201ENST00000378154 2494 ntTSL 5 BASIC24.34■■□□□ 1.49
KCNA3P22001 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC24.34■■□□□ 1.49
KCNA3P22001 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
KCNA3P22001 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
KCNA3P22001 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
KCNA3P22001 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
KCNA3P22001 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
KCNA3P22001 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC24.33■■□□□ 1.49
KCNA3P22001 HYMAI.1-201ENST00000620949 238 ntBASIC24.33■■□□□ 1.49
KCNA3P22001 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
KCNA3P22001 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.33■■□□□ 1.49
KCNA3P22001 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
KCNA3P22001 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.48
KCNA3P22001 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
KCNA3P22001 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.32■■□□□ 1.48
KCNA3P22001 AC018553.1-201ENST00000616682 1458 ntBASIC24.32■■□□□ 1.48
KCNA3P22001 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
KCNA3P22001 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.32■■□□□ 1.48
KCNA3P22001 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
KCNA3P22001 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
KCNA3P22001 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
KCNA3P22001 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.32■■□□□ 1.48
KCNA3P22001 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
KCNA3P22001 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
KCNA3P22001 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
KCNA3P22001 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms