Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PPP3CBP16298 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PPP3CBP16298 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PPP3CBP16298 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.69■□□□□ 0.42
PPP3CBP16298 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
PPP3CBP16298 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PPP3CBP16298 AP005212.1-201ENST00000581547 1997 ntBASIC17.69■□□□□ 0.42
PPP3CBP16298 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PPP3CBP16298 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.69■□□□□ 0.42
PPP3CBP16298 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.69■□□□□ 0.42
PPP3CBP16298 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PPP3CBP16298 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PPP3CBP16298 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.69■□□□□ 0.42
PPP3CBP16298 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPP3CBP16298 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPP3CBP16298 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPP3CBP16298 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPP3CBP16298 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PPP3CBP16298 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PPP3CBP16298 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PPP3CBP16298 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PPP3CBP16298 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.68■□□□□ 0.42
PPP3CBP16298 RPS2P4-201ENST00000476944 856 ntBASIC17.68■□□□□ 0.42
PPP3CBP16298 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.68■□□□□ 0.42
PPP3CBP16298 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPP3CBP16298 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PPP3CBP16298 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
PPP3CBP16298 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PPP3CBP16298 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPP3CBP16298 AC027702.1-201ENST00000563810 1770 ntBASIC17.68■□□□□ 0.42
PPP3CBP16298 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PPP3CBP16298 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PPP3CBP16298 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PPP3CBP16298 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPP3CBP16298 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPP3CBP16298 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPP3CBP16298 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPP3CBP16298 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PPP3CBP16298 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPP3CBP16298 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
PPP3CBP16298 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.67■□□□□ 0.42
PPP3CBP16298 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PPP3CBP16298 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPP3CBP16298 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPP3CBP16298 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPP3CBP16298 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPP3CBP16298 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPP3CBP16298 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPP3CBP16298 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.67■□□□□ 0.42
PPP3CBP16298 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.67■□□□□ 0.42
PPP3CBP16298 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PPP3CBP16298 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.67■□□□□ 0.42
PPP3CBP16298 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PPP3CBP16298 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.67■□□□□ 0.42
PPP3CBP16298 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PPP3CBP16298 AC120498.8-201ENST00000614275 531 ntBASIC17.67■□□□□ 0.42
PPP3CBP16298 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.67■□□□□ 0.42
PPP3CBP16298 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPP3CBP16298 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PPP3CBP16298 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PPP3CBP16298 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.67■□□□□ 0.42
PPP3CBP16298 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PPP3CBP16298 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PPP3CBP16298 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPP3CBP16298 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.67■□□□□ 0.42
PPP3CBP16298 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PPP3CBP16298 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PPP3CBP16298 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PPP3CBP16298 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PPP3CBP16298 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PPP3CBP16298 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PPP3CBP16298 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PPP3CBP16298 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PPP3CBP16298 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.66■□□□□ 0.42
PPP3CBP16298 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PPP3CBP16298 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.66■□□□□ 0.42
PPP3CBP16298 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.66■□□□□ 0.42
PPP3CBP16298 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.66■□□□□ 0.42
PPP3CBP16298 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.66■□□□□ 0.42
PPP3CBP16298 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PPP3CBP16298 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PPP3CBP16298 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PPP3CBP16298 AC018445.3-201ENST00000624177 1945 ntBASIC17.66■□□□□ 0.42
PPP3CBP16298 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PPP3CBP16298 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PPP3CBP16298 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PPP3CBP16298 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.66■□□□□ 0.42
PPP3CBP16298 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PPP3CBP16298 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PPP3CBP16298 BX323043.1-201ENST00000641006 1765 ntBASIC17.66■□□□□ 0.42
PPP3CBP16298 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PPP3CBP16298 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PPP3CBP16298 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PPP3CBP16298 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PPP3CBP16298 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PPP3CBP16298 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PPP3CBP16298 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
PPP3CBP16298 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PPP3CBP16298 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PPP3CBP16298 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms