Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.83■■□□□ 1.41
CHGBP05060 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.83■■□□□ 1.41
CHGBP05060 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CHGBP05060 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
CHGBP05060 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHGBP05060 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHGBP05060 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
CHGBP05060 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
CHGBP05060 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CHGBP05060 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
CHGBP05060 AC239809.2-201ENST00000415381 517 ntBASIC23.82■■□□□ 1.4
CHGBP05060 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CHGBP05060 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHGBP05060 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.82■■□□□ 1.4
CHGBP05060 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.82■■□□□ 1.4
CHGBP05060 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHGBP05060 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHGBP05060 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CHGBP05060 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHGBP05060 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHGBP05060 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHGBP05060 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CHGBP05060 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CHGBP05060 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CHGBP05060 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CHGBP05060 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.81■■□□□ 1.4
CHGBP05060 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.81■■□□□ 1.4
CHGBP05060 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
CHGBP05060 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHGBP05060 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHGBP05060 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHGBP05060 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CHGBP05060 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.81■■□□□ 1.4
CHGBP05060 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.81■■□□□ 1.4
CHGBP05060 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.81■■□□□ 1.4
CHGBP05060 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.81■■□□□ 1.4
CHGBP05060 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.81■■□□□ 1.4
CHGBP05060 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.81■■□□□ 1.4
CHGBP05060 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CHGBP05060 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.81■■□□□ 1.4
CHGBP05060 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CHGBP05060 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CHGBP05060 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CHGBP05060 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHGBP05060 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CHGBP05060 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.8■■□□□ 1.4
CHGBP05060 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CHGBP05060 AC133681.1-201ENST00000465482 601 ntBASIC23.8■■□□□ 1.4
CHGBP05060 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.8■■□□□ 1.4
CHGBP05060 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHGBP05060 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.8■■□□□ 1.4
CHGBP05060 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.8■■□□□ 1.4
CHGBP05060 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.8■■□□□ 1.4
CHGBP05060 AL121906.2-201ENST00000621597 723 ntBASIC23.8■■□□□ 1.4
CHGBP05060 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHGBP05060 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHGBP05060 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.8■■□□□ 1.4
CHGBP05060 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.8■■□□□ 1.4
CHGBP05060 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHGBP05060 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHGBP05060 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.79■■□□□ 1.4
CHGBP05060 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.79■■□□□ 1.4
CHGBP05060 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHGBP05060 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHGBP05060 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHGBP05060 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHGBP05060 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHGBP05060 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.79■■□□□ 1.4
CHGBP05060 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHGBP05060 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC23.79■■□□□ 1.4
CHGBP05060 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CHGBP05060 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHGBP05060 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC23.78■■□□□ 1.4
CHGBP05060 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.78■■□□□ 1.4
CHGBP05060 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHGBP05060 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHGBP05060 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.78■■□□□ 1.4
CHGBP05060 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.78■■□□□ 1.4
CHGBP05060 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.78■■□□□ 1.4
CHGBP05060 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.78■■□□□ 1.4
CHGBP05060 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHGBP05060 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.77■■□□□ 1.4
CHGBP05060 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.77■■□□□ 1.4
CHGBP05060 NBPF21P-201ENST00000425093 1451 ntBASIC23.77■■□□□ 1.4
CHGBP05060 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
CHGBP05060 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.77■■□□□ 1.4
CHGBP05060 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
CHGBP05060 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHGBP05060 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.77■■□□□ 1.4
CHGBP05060 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23.77■■□□□ 1.4
CHGBP05060 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.77■■□□□ 1.4
CHGBP05060 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CHGBP05060 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
CHGBP05060 Z99916.2-201ENST00000604037 246 ntBASIC23.77■■□□□ 1.4
CHGBP05060 FAM197Y4-202ENST00000622692 608 ntBASIC23.77■■□□□ 1.4
CHGBP05060 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.77■■□□□ 1.4
CHGBP05060 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CHGBP05060 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
CHGBP05060 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHGBP05060 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms