Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD3DP04234 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD3DP04234 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CD3DP04234 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.74■□□□□ 0.27
CD3DP04234 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.74■□□□□ 0.27
CD3DP04234 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CD3DP04234 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.74■□□□□ 0.27
CD3DP04234 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.74■□□□□ 0.27
CD3DP04234 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.74■□□□□ 0.27
CD3DP04234 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CD3DP04234 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.74■□□□□ 0.27
CD3DP04234 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.74■□□□□ 0.27
CD3DP04234 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.74■□□□□ 0.27
CD3DP04234 AC010141.2-201ENST00000452426 721 ntBASIC16.74■□□□□ 0.27
CD3DP04234 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.74■□□□□ 0.27
CD3DP04234 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.74■□□□□ 0.27
CD3DP04234 SLC7A5P2-201ENST00000553010 536 ntBASIC16.74■□□□□ 0.27
CD3DP04234 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.74■□□□□ 0.27
CD3DP04234 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CD3DP04234 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.74■□□□□ 0.27
CD3DP04234 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.74■□□□□ 0.27
CD3DP04234 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
CD3DP04234 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD3DP04234 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CD3DP04234 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CD3DP04234 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD3DP04234 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD3DP04234 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.73■□□□□ 0.27
CD3DP04234 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD3DP04234 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.73■□□□□ 0.27
CD3DP04234 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD3DP04234 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD3DP04234 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CD3DP04234 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD3DP04234 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CD3DP04234 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD3DP04234 AC091799.1-201ENST00000422823 811 ntBASIC16.73■□□□□ 0.27
CD3DP04234 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.73■□□□□ 0.27
CD3DP04234 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD3DP04234 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.73■□□□□ 0.27
CD3DP04234 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.73■□□□□ 0.27
CD3DP04234 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.73■□□□□ 0.27
CD3DP04234 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD3DP04234 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD3DP04234 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD3DP04234 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CD3DP04234 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.73■□□□□ 0.27
CD3DP04234 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.73■□□□□ 0.27
CD3DP04234 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD3DP04234 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD3DP04234 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD3DP04234 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD3DP04234 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CD3DP04234 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD3DP04234 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD3DP04234 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CD3DP04234 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CD3DP04234 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.72■□□□□ 0.27
CD3DP04234 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CD3DP04234 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.72■□□□□ 0.27
CD3DP04234 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CD3DP04234 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD3DP04234 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD3DP04234 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.72■□□□□ 0.27
CD3DP04234 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD3DP04234 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD3DP04234 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.72■□□□□ 0.27
CD3DP04234 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD3DP04234 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD3DP04234 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD3DP04234 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD3DP04234 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD3DP04234 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.72■□□□□ 0.27
CD3DP04234 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD3DP04234 AL355001.2-201ENST00000620617 1191 ntBASIC16.72■□□□□ 0.27
CD3DP04234 AL358852.1-201ENST00000623174 1268 ntBASIC16.72■□□□□ 0.27
CD3DP04234 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD3DP04234 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD3DP04234 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.72■□□□□ 0.27
CD3DP04234 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms