Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQA2P01906 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQA2P01906 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQA2P01906 AC125437.2-201ENST00000625180 2167 ntBASIC17.73■□□□□ 0.43
HLA-DQA2P01906 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQA2P01906 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQA2P01906 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQA2P01906 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQA2P01906 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HLA-DQA2P01906 AC006015.1-201ENST00000429970 570 ntBASIC17.73■□□□□ 0.43
HLA-DQA2P01906 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.73■□□□□ 0.43
HLA-DQA2P01906 CYP2T1P-201ENST00000432607 1285 ntBASIC17.73■□□□□ 0.43
HLA-DQA2P01906 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQA2P01906 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.73■□□□□ 0.43
HLA-DQA2P01906 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.73■□□□□ 0.43
HLA-DQA2P01906 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-DQA2P01906 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQA2P01906 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQA2P01906 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQA2P01906 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HLA-DQA2P01906 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQA2P01906 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQA2P01906 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQA2P01906 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-DQA2P01906 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQA2P01906 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 KRT8P17-201ENST00000453110 1448 ntBASIC17.72■□□□□ 0.43
HLA-DQA2P01906 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 AL162430.1-201ENST00000480705 870 ntBASIC17.72■□□□□ 0.43
HLA-DQA2P01906 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.72■□□□□ 0.43
HLA-DQA2P01906 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 KRT16P6-202ENST00000425692 1426 ntBASIC17.72■□□□□ 0.43
HLA-DQA2P01906 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQA2P01906 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQA2P01906 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQA2P01906 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQA2P01906 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQA2P01906 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQA2P01906 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQA2P01906 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQA2P01906 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQA2P01906 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HLA-DQA2P01906 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.71■□□□□ 0.43
HLA-DQA2P01906 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-DQA2P01906 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.71■□□□□ 0.43
HLA-DQA2P01906 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQA2P01906 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HLA-DQA2P01906 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQA2P01906 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQA2P01906 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HLA-DQA2P01906 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HLA-DQA2P01906 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HLA-DQA2P01906 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
HLA-DQA2P01906 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA2P01906 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA2P01906 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA2P01906 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DQA2P01906 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA2P01906 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DQA2P01906 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA2P01906 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA2P01906 AL355472.2-201ENST00000422958 438 ntBASIC17.7■□□□□ 0.42
HLA-DQA2P01906 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA2P01906 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.7■□□□□ 0.42
HLA-DQA2P01906 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DQA2P01906 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA2P01906 CYP2T3P-201ENST00000601990 817 ntBASIC17.7■□□□□ 0.42
HLA-DQA2P01906 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
HLA-DQA2P01906 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA2P01906 AC116562.4-201ENST00000641316 2276 ntBASIC17.7■□□□□ 0.42
HLA-DQA2P01906 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA2P01906 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA2P01906 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DQA2P01906 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA2P01906 KRT8P20-201ENST00000423953 1409 ntBASIC17.7■□□□□ 0.42
HLA-DQA2P01906 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA2P01906 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HLA-DQA2P01906 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms