Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN1O95832 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN1O95832 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN1O95832 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN1O95832 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN1O95832 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN1O95832 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN1O95832 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CLDN1O95832 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CLDN1O95832 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN1O95832 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN1O95832 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN1O95832 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN1O95832 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN1O95832 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN1O95832 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
CLDN1O95832 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN1O95832 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.65■□□□□ 0.42
CLDN1O95832 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.65■□□□□ 0.42
CLDN1O95832 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN1O95832 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN1O95832 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN1O95832 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN1O95832 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN1O95832 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN1O95832 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CLDN1O95832 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLDN1O95832 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLDN1O95832 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.64■□□□□ 0.42
CLDN1O95832 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLDN1O95832 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN1O95832 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN1O95832 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN1O95832 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN1O95832 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN1O95832 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN1O95832 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN1O95832 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN1O95832 ECEL1P2-202ENST00000465689 757 ntBASIC17.64■□□□□ 0.41
CLDN1O95832 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN1O95832 AC063952.2-201ENST00000498792 1227 ntBASIC17.64■□□□□ 0.41
CLDN1O95832 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.64■□□□□ 0.41
CLDN1O95832 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN1O95832 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN1O95832 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.64■□□□□ 0.41
CLDN1O95832 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.64■□□□□ 0.41
CLDN1O95832 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
CLDN1O95832 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN1O95832 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN1O95832 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN1O95832 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.64■□□□□ 0.41
CLDN1O95832 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLDN1O95832 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN1O95832 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CLDN1O95832 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN1O95832 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.63■□□□□ 0.41
CLDN1O95832 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLDN1O95832 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.63■□□□□ 0.41
CLDN1O95832 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CLDN1O95832 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLDN1O95832 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN1O95832 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN1O95832 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN1O95832 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CLDN1O95832 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
CLDN1O95832 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN1O95832 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN1O95832 AC009947.2-201ENST00000444014 672 ntBASIC17.63■□□□□ 0.41
CLDN1O95832 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.63■□□□□ 0.41
CLDN1O95832 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN1O95832 LINC01238-205ENST00000567549 1107 ntBASIC17.63■□□□□ 0.41
CLDN1O95832 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN1O95832 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
CLDN1O95832 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN1O95832 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN1O95832 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN1O95832 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN1O95832 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN1O95832 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.63■□□□□ 0.41
CLDN1O95832 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.63■□□□□ 0.41
CLDN1O95832 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN1O95832 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN1O95832 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN1O95832 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN1O95832 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN1O95832 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CLDN1O95832 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN1O95832 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN1O95832 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN1O95832 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN1O95832 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN1O95832 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN1O95832 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN1O95832 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CLDN1O95832 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN1O95832 DUSP5P1-201ENST00000441325 1139 ntBASIC17.62■□□□□ 0.41
CLDN1O95832 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN1O95832 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN1O95832 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN1O95832 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms